Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02695 ATGGGGCATTTTTCCTCGATGTTCAATGGGTTGGCACGGTCGTTTTCAATGAAGAAAGGAAGAAAGAATGAGAAATGCGAAGGGAGGGAAGCCGCCGAAGCAATGGCAAAGGAGGCTAAGAAGAATGACATGATGCTGTGTAGCTCTGGCATAGTTCATGTCTATGGTTCAAACAACTTTGCCTCCGTATTCTCCAAAAGAGGTCAGAAAGGAGTGAACCAAGATTGTTGCATAGTGTGGGAGGAATTTGGATGCCAAGAGGACACGATCTTCTGTGGGATTTTTGATGGGCATGGACCATGGGGTCACTTTGTGGCCAAAAGAGTAAGAGAGTCAATGCCACCATCTTTGCTATGCAACTGGCAGGAGACGCTAGCCCAAACTTCAGTTGATCCCGGTGTTGATGTAGAGGAAGGAAAAAGGCAACTTTACCGATTCAACGTATGGAAGCACTCTTACTTGAAGACATGTGCGGCCATTGACGAAGAACTGAAGCAGCAGCGCAAGATAGACTCGTTTTACAGCGGAACAACTGCCCTATCAATTGTTAGACAGGGTGAACTCATTGTCGTAGCAAATGTTGGTGACTCTCGTGCTGTGTTGGCTACAACATCAGATGAAGGAAGTTTGGTAGCGGTTCAACTAACAGTTGATTTCAAGCCCAATTTACCCCAAGAAGCAGAGAGAATAATTCAGTGCCAGGGGCGTGTGTTCTGCCTAGAGGACGAGCCAGGGGTGCATAGGGTATGGTTGCCTGATGCAGAGTCTCCAGGACTAGCCATGTCTAGGGCCTTTGGTGACTACTGCATTAAAGGGCATGGCCTAATTTCTGTGCCTGAGGTAACCCACAGAAATATAAGTGTTAGAGACCAGTTTGTGGTGCTAGCCACTGATGGGGTTTGGGATGTAATATCTAACAAAGAAGCAGTGGAAATTGTATCTTCAACAGCAGATCAAGCTAAGGCAGCTAAAAAGTTGGTAGAGTGTGCGGAACATGCATGGAAACGCAAGAGACGGGGCATTGCCGTGGATGACATTTCAGCCATTTGTCTTTTCTTTCACTCTTCCTTTTAA 1074 0.4646 MGHFSSMFNGLARSFSMKKGRKNEKCEGREAAEAMAKEAKKNDMMLCSSGIVHVYGSNNFASVFSKRGQKGVNQDCCIVWEEFGCQEDTIFCGIFDGHGPWGHFVAKRVRESMPPSLLCNWQETLAQTSVDPGVDVEEGKRQLYRFNVWKHSYLKTCAAIDEELKQQRKIDSFYSGTTALSIVRQGELIVVANVGDSRAVLATTSDEGSLVAVQLTVDFKPNLPQEAERIIQCQGRVFCLEDEPGVHRVWLPDAESPGLAMSRAFGDYCIKGHGLISVPEVTHRNISVRDQFVVLATDGVWDVISNKEAVEIVSSTADQAKAAKKLVECAEHAWKRKRRGIAVDDISAICLFFHSSF 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02695 357 CDD PP2Cc 59 353 IPR001932 -
Vian2g02695 357 SUPERFAMILY PP2C-like 48 354 IPR036457 -
Vian2g02695 357 Gene3D - 53 355 IPR036457 -
Vian2g02695 357 PANTHER PROTEIN PHOSPHATASE 35 351 IPR015655 GO:0004722|GO:0006470
Vian2g02695 357 ProSiteProfiles PPM-type phosphatase domain profile. 60 353 IPR001932 -
Vian2g02695 357 FunFam Probable protein phosphatase 2C 34 51 355 - -
Vian2g02695 357 Pfam Protein phosphatase 2C 75 329 IPR001932 -
Vian2g02695 357 SMART PP2C_4 51 351 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02695 Vian-Chr2 47834485 47836114 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02695 1 354 PP2C-type Phosphatase Gene Family AT3G05640 72.191 0.0 544
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02695 - - var:108327803 721.465