Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02681 ATGAAACAAGACTTTGATCTTGAAGTGGTGGCCTCAGCAGAATATGAATCTGAAGTTAGCAGCCAGGTTGCTTCCAACATATCTATTCAAGAAACCTGTGCAGGTCCTTGCAGTGACAACCTCGTCAACTCTCCCCATGTCACAAAACCAATAGAATTTCATCTCCATTCAGATGCTATCTCACTTGACTTAACTCTCAACTTCAACAACAATGACTTGGTGGTTACAGATTCAACAGGACTCTCATTCTCAAGCACTACTAGCGAGAGCAACAACGATCCTCCCTCTCAGAGTACTCCCTCTCAAACCATGCCACGGGTCTTCTCTTGCAATTACTGTAACCGCAAGTTTTTGAGCTCTCAGGCTCTTGGAGGCCACCAAAATGCCCACAAGAGAGAAAGAACATTAGCAAAGAGAGCCTTGCGCATGGGTTTTTTCTCTGAGAGGTATGTCAGTCTTGCATCTCTCCCTCTTCATGGTTCTTTCAGGTCCTTAGGGATAAAGGCACATTCTTCACTTCACCAAGGCTTTTCACCAACAATGAGACCTCCCGAGATGAAAAGCAGTGCAAGATTTGAGCAAGGATATGTTGGTTTTCCAATATTCTTGGAGGAGGATGAGGCAGAACTCTTGTGGCAAGGTAGTTACCATCAGGTTCCCTCTAATGGAGGCCATACTCATCAGAATTTCACACTGAGTGGAACCTCTAATTTGAGTTTTAATGGGGTGAATCATCCACCGGTTGACATAGAGAACTCAGCACCTGAGTTGACATTGAAACTTTGA 786 0.444 MKQDFDLEVVASAEYESEVSSQVASNISIQETCAGPCSDNLVNSPHVTKPIEFHLHSDAISLDLTLNFNNNDLVVTDSTGLSFSSTTSESNNDPPSQSTPSQTMPRVFSCNYCNRKFLSSQALGGHQNAHKRERTLAKRALRMGFFSERYVSLASLPLHGSFRSLGIKAHSSLHQGFSPTMRPPEMKSSARFEQGYVGFPIFLEEDEAELLWQGSYHQVPSNGGHTHQNFTLSGTSNLSFNGVNHPPVDIENSAPELTLKL 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02681 261 ProSitePatterns Zinc finger C2H2 type domain signature. 110 130 IPR013087 -
Vian2g02681 261 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 54 194 IPR044246 GO:0009788
Vian2g02681 261 MobiDBLite consensus disorder prediction 81 104 - -
Vian2g02681 261 Gene3D Classic Zinc Finger 84 149 - -
Vian2g02681 261 SUPERFAMILY beta-beta-alpha zinc fingers 106 135 IPR036236 -
Vian2g02681 261 ProSiteProfiles Zinc finger C2H2 type domain profile. 108 135 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02681 Vian-Chr2 47680753 47681538 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02681 106 261 C2H2 Transcription Factor Family AT1G66140 50.829 1.49e-44 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02681 - - gmx:100815175 388.267