Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02665 ATGGGAAAAAGAGTTGGTGATAGGATTGAGTTAGTGGAGTATCTCACGCTTCCAACCAAAGCAAAGAAGTTTGATGATGTGGTGTTTTCTGAAGAAGACGTAGCACGTGTGGACCGTGTCACATCCCTGCAGAACACGGCCCATGGACTGCAGAGGAAGATAAGAAACTCATCAACTTCATCCTTACCAATGGCCAATGTTGCTGGAGAGCTGTGGTCTAAGATTGCTTCTCATCTTCCAGGAAGAACTGATAATGAGATCAAGAATCACTGGAACACTCACATAAAGAAAAAGCTCAAGAAAATGGGAATTGATCCTGTTACCCACAAGTCACTTTCCATTACAACTGAGCAAAGCCAAGCCCAACCAGATCAACAACCCAATCAGCCATTGCAAGAACCACAAGATCAGCAACAAGCTATCCAAGTTGAGGAAGACCCAAAATTTGAGCCTGAAAATGGGCAAAACAAGGAGCCAGAGAAGGCAGAGACTTCATTTGATGTATCAACCATCACCGAAGAAGCTAAGGAGGAAGACCAAATCATGATACCCCTTTTTGAATCGATAATGAATGAGTTATTCACTGATGAAGTTCCCATTATAGAGCCCAGTGAGATATTAGTTCCATCTGCTACTTCCACTTCACCAACCACTACATCATCTTCAACGTCATCGTCTTCATATTCAAATTCCCCCAACTTCTTTGAAGACCTGCAGCTCCCAGATTTTGACTGGTCTGATGATTACAATGATACTAAGATTGACAACAACAATAGCAGTGTGGCCTTGTGGGATGATGACTTGATTAGAAGTTGGAATATGCTTATTAATGATGATGGCGATGGTGACAGAAAGCAAGTGTTTGACACTTCTGCTAATCAGTACCCAAGACTCATCATGGATTCAGAATCTTGGGCATATGGGTTGTTTTGA 933 0.4223 MGKRVGDRIELVEYLTLPTKAKKFDDVVFSEEDVARVDRVTSLQNTAHGLQRKIRNSSTSSLPMANVAGELWSKIASHLPGRTDNEIKNHWNTHIKKKLKKMGIDPVTHKSLSITTEQSQAQPDQQPNQPLQEPQDQQQAIQVEEDPKFEPENGQNKEPEKAETSFDVSTITEEAKEEDQIMIPLFESIMNELFTDEVPIIEPSEILVPSATSTSPTTTSSSTSSSSYSNSPNFFEDLQLPDFDWSDDYNDTKIDNNNSSVALWDDDLIRSWNMLINDDGDGDRKQVFDTSANQYPRLIMDSESWAYGLF 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02665 310 Gene3D - 47 140 - -
Vian2g02665 310 MobiDBLite consensus disorder prediction 207 231 - -
Vian2g02665 310 Pfam Myb-like DNA-binding domain 69 94 IPR001005 -
Vian2g02665 310 SUPERFAMILY Homeodomain-like 70 104 IPR009057 -
Vian2g02665 310 CDD SANT 72 95 IPR001005 -
Vian2g02665 310 PANTHER F14D16.11-RELATED 67 256 - -
Vian2g02665 310 SMART sant 25 97 IPR001005 -
Vian2g02665 310 MobiDBLite consensus disorder prediction 114 142 - -
Vian2g02665 310 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 72 99 IPR017930 -
Vian2g02665 310 ProSiteProfiles Myb-like domain profile. 72 95 IPR001005 -
Vian2g02665 310 MobiDBLite consensus disorder prediction 114 175 - -
Vian2g02665 310 MobiDBLite consensus disorder prediction 143 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02665 Vian-Chr2 47507621 47509969 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02665 69 310 MYB Transcription Factor Family AT5G16600 32.979 8.31e-30 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Vian2g02665 Myb_DNA-binding 3.9e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02665 K09422 - gmx:100803624 312.383