Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02656 ATGGAGGACTTGCTGGGTCTGTTGAGAATTCATGTTGAGAAAGGTGTCAATCTTGCAATCAGGGATGTGGTGAGCAGTGATCCTTATGTTGTCATCAAAATGGGCAAGCAGAAGCTGAAGACTCGGGTGGTTAAAAAGAATTTAAATCCTGAATGGAATGATGACTTGACCCTGTCTATTTCAGATCCTCATGCTCCAGTCCATTTACATGTGTATGACAAGGACACATTCAGCTTAGATGACAAAATGGGGGATGCTGATTTTTCCATTGGTCCATTCATTGAAGCAGTGAAGATGCGCTTGACAGGTCTCCCCAACAATACCATAGTTACAAAAGTGTTGCCTAGCAGACAAAACTGCTTAGCTGAAGAGAGTCACATTGTGTGGAAGGATGGCAAAGTTGTGCAAAACCTGGTTCTTAGACTAAGAAATGTAGAGTGTGGGGAGGTGGAACTCCAGTTGAATTGGATTGACATTCCTGGTTCAAGGCATCTCTAG 498 0.4317 MEDLLGLLRIHVEKGVNLAIRDVVSSDPYVVIKMGKQKLKTRVVKKNLNPEWNDDLTLSISDPHAPVHLHVYDKDTFSLDDKMGDADFSIGPFIEAVKMRLTGLPNNTIVTKVLPSRQNCLAEESHIVWKDGKVVQNLVLRLRNVECGEVELQLNWIDIPGSRHL 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02656 165 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Vian2g02656 165 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 150 IPR035892 -
Vian2g02656 165 CDD C2_ArfGAP 5 148 - -
Vian2g02656 165 Gene3D C2 domain 3 164 IPR035892 -
Vian2g02656 165 Pfam C2 domain 6 92 IPR000008 -
Vian2g02656 165 SMART C2_3c 7 102 IPR000008 -
Vian2g02656 165 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 4 163 IPR044562 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02656 Vian-Chr2 47378594 47380468 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02656 38 165 C2H2 Transcription Factor Family AT1G70790 56.154 2.27e-49 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02656 - - pvu:PHAVU_001G230800g 311.612
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02656 2 47378594 47380468 Vian8g01405 8 33316225 33317860 ECH
Vian2g02656 2 47378594 47380468 Vian2g02656 2 47378594 47380468 ECH