Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02637 ATGGCTGATGCAATTGATTTGACCGGGGATGGAGGAGTCATTAAGACCATTTTGAGAAAAAGCAAAACCGATGCTGTTGGTCCTACAGAAAATTTTCCTCTTGTTGATGTTCACTATGAAGGCACACTTGCTGATACCGGTGAAGTTTTTGACACAACACACGAAGATAACACTATCTTCTCTTTTGAGCTTGGGAAGGGCAGTGTTATCAAGGCTTGGGAGATTGCAGTCAAAACCATGAAGGTCGGAGAAGTTGCAAAAATAACTTGCAAGCCAGAATATGCATATGGCAGTGCGGGATCTCCTCCAGATATTCCTCCAGAAGCAACACTTGTTTTTGAAGTTGAGTTAGTTGCCTGTCGGCCAAGGAAGGGTTCCAGTTTGGGAAGTGTTTCAGAGGAGAGGGCAAGGCTTGAAGAACTGAAGAAGCAGAGAGAGCTAGCTGCTGCTGTCAAAGAAGAAGAGAAGAAGAAGAGAGAAGAAGCAAAAGCAGCTGCTGCTGCACGTCTGCAAGCAAAGTTAGAAGCCAAAAAAGGTCAAGGAAAGGGTAAAGGTAAAGCAAAGTAG 567 0.4444 MADAIDLTGDGGVIKTILRKSKTDAVGPTENFPLVDVHYEGTLADTGEVFDTTHEDNTIFSFELGKGSVIKAWEIAVKTMKVGEVAKITCKPEYAYGSAGSPPDIPPEATLVFEVELVACRPRKGSSLGSVSEERARLEELKKQRELAAAVKEEEKKKREEAKAAAAARLQAKLEAKKGQGKGKGKAK 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02637 188 FunFam Peptidylprolyl isomerase 1 120 - -
Vian2g02637 188 SUPERFAMILY FKBP-like 8 124 - -
Vian2g02637 188 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 32 121 IPR001179 GO:0003755
Vian2g02637 188 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 11 181 - -
Vian2g02637 188 Coils Coil 131 177 - -
Vian2g02637 188 Gene3D - 2 120 IPR046357 GO:0003755
Vian2g02637 188 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 34 118 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02637 Vian-Chr2 47085218 47090464 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02637 4 173 Calmodulin-binding Proteins AT5G48570 33.005 3.06e-13 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02637 K01802 - gmx:100500018 288.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02637 2 47085218 47090464 Vian2g02637 2 47085218 47090464 ECH