Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02621 ATGCAAATGCAAACTGATTTTAATGCGGTAGAGGATCAATATGAGCTATGTGAGGCTGGATATCCAAACAAAACTGCTATAGCATGCATGATAAATGCAGAGATTAGTGCTGTGTTGGCAGTTATGCGAAGAAATGTTAGATGGGGAATTCATTACATTTCAGATGATGATCAATCAGAGCACTACCTTGTTCAGTCATTAAAGACGTTGAGGAGACAAATTTTCTCATGGAAGAATCAATGGCGTGCCATCAACCCTGCCTTGTATCTCCAGCCTTTTCTGGATGTGATACGATCAGATGAAACTAGTGCGCCTATTACTGGTGTTGCTTTGTCATCTGTTTACAAAATCTTAACTCTAGATGTGATTGATAAGCACACTGTCAAGGTTGGGGATACCATGCACTTGGTGGTTGATTCCGTCACTAGTTGCAGATTTGAAGTGACTGACCCTGGATCAGAAGAAGTGGTATTAATGAAGATTTTGCAAGTTCTTCTAGCTTGTGTTAAAGGTAAAGCATCTGTAATGCTGAGTAACCAACACGTTTGCACCATAGTGAACACCTGTTTCCGAATAGTTCATCAAGCAGGAACCAAAGGTGAGCTGTTCCAACGAATAGCACGGTACACAATGCATGAACTGGTTAGGTCTATATTTTCTCACCTTCAGAACATTGACAACACAAAGTGTGGATTCATAAATGGGAGCGCTACCTTAAAGCAAGTGGTAGATTGTCCGAAACTTATCGGGAAAGAAGGAAAAATGCTTGCAATAACGTATGTTAATAAAGTAAAATCTGGTGGGGGCGCAGCGGGGTGGGGTGGGGTGGGGACCAATGGACTAAATAATGACCATGCTCTGGCAAGCAGAAAATTGGAAAATGAGAGGCTTAATTCTGCACGTGATGCTCAACCATTATCTACAATCACTGCTTCCGGCGCTGCACCTGTTGTGGCAGCAAACGCAGTGGATGAAAACACAGCTATTGCTAGCAGTGGCAATGAAACTGATCCACACGAATTACTGCTCATGACTCATGGGGTTCCTTGTATAGTGGAAATATTTCACTTCTTGTGTTCTTTGCTGAATGTCACTGAGCATATGGGAGTGAATCCTAGATCAAACACAATGACGTTTGATGAAGATGTGCCTCTTTTTTCGTTAACTTTGATTAATTCGGCCATAGAGTTGGGAGGGCCATCCTTCTGCCATCACCCAAGACTGCTGTGTTTAATCCAGGATGAATTATTCTTCAATCTTATGCAATTTGGTTTATCAATGAGCCCTCTTGTAGTTTCGATGGTGTGTAGCATTGTTCTCAATTTGTATCACCATCTTCGCCAAGAACTCAAGTTACAGCTAGAAGCATTTTTTTCTTGCATAATTTTGAGGCTTGCACAAAGCAAATATGGTGCCTCATATCAGCAACAAGAGGTTGTGATGGAAGCACTCGTTGATTTTTGCAGGCAAAAAACATTCATGGTGGAGATGTACGCCAACTTTGACTGTGACATAAGTTGCAGTGATATCTTTGAAGATATTGTTGATTTGTTGTCCAAAAGTGCATTTCCTGTGAACAATCCATTATCTTCCATGCACATTCTTTCCTTAGATGGTCTTATTGCTGTAATGCAGGGAATTTCCGAAAGAATAGGTAGTGAATCTTTAAGTTCAAAACAATCTCCTGTGAATTTTGAGGAGTATACACCATTCTGGATGGAAAAGTGTGACAGTTTTGATGACCCAAATGATTGGGTTCCTTTTGTCTGCCAAAGAAAGTACATAAAGAGAAAATTAATGATTGGAGCTGATCACTTCAATCGGGATATTAAGAAAGGTCTTGAGTTTCTCCAAGGAGCACATCTTTTGCCTAACAAACCTGATTCCCAAAGTGTTGCCTGCTTTTTAAGATACACAGCTGGGTTGGATAAGAATTCCATTGGTGATTTCCTTGGAGATCATGATGAATTCTACATTCAGGTTCTTCATGAATTTGCTAAGACATTTGATTTCCATGATATGACCTTAGACACAGCCCTACGTGTATTTTTGGAGACTTTTAGGCTTCCTGGAGAATCACAGAAGATACACAGGGTGCTTGAAGCTTTCTCTGAGAGATATTATGAACAATCACCAGATATCCTAGCTAACAAGGATGCTGCTCTCGTGTTATCATACTCAATTATATTGCTTAATACTGATCATCATAATGTGCAGGTCAAAAAGAAGATGACAGAAGAGGATTTTATCCGAAATAATAGGCATATAAATGGTGGCAATGATCTGCCTCGAGAATTTCTGTCAGAGATTTACCATTCAATTTGTAAGAGTGAAATTCGTACCACTCTTGAACCAGGCTTTGGATTTCCTGAAATGACCCCAAGTCGGTGGATTTCTCTGATGCACGAGGCAAATAAAACTTCTCCATACATTGTCTCGGATTCCCGAGCATACTTAGATTATGATATGTTTGTGTTGTTGTCAGGCCCAACAATTGTTGCCATTTCTGTGGCTTTTGATAATGCGGAAAATAAAGAGGTATATCAAAGATGTATGGATGGATTCTTAGTTGCTGCTAAGATATCAGCCCACTATCGTCTTGAAAACGTACTTGATGATCTGGTTGTGTGCATCTGTAAGTTCATTACCATTTTGGATCCATTATCAGTTGAGGATTCTGTCCTGGCCTTGGGAGATGACACAAAAGTAAGAATTGCAACTGAGACAGTTTTCACTATTGCAAATAGGTATGGTGATTACATCCGCACAGGGTGGAGGAGTATTCTTGATTGTATTTTAATATTTTACAAGTTAGGCCTCCTTCCTCCTCGCTTGGCCAGTGATGCAGCTGACGAGTCTCAGGTAACTACAGAAATTGGACATGGAAAATCTAACTCATATTCTATAGTGTCATCTAATCTTCAATATATTGCTCCAAAGAGATCCTCAGGATTAATTAGTAGGTTTAGTCAACTCTTATCACTTGGTTCTGAAGATATACAATCAATACCGACAAAAGAACAGCTGGCTGCTCATCAGCAAGCTACACAAGCAATTCAGAAGTGTCACATTGATAGCATATTCACTGAGAGTAAATTTCTGCAAGCTGAATCTCTATTGAATCTTGAAAGAGCACTCATCAATGCTGGAGCTCAACATCTGAAAGGAAACAGAATACGTGAGGATGAAGAGTCTTCAGTTTTCTGCCTGGAGTTATTGGTGGCAATTACTCTGAATAACAGGGACAGAGTTGTACTTCTTTGGAAGGGTGTTTATGAACACATATCCAATATTATTCAGTCAACTGTGATACCCTGTGCCCTGGTTGAAAAGGCTATTTTTGGACTTCTTAGAATTTGCCACCGCTTACTTCCCTACAAAGAGAACATTACCGATGAACTTTTGAGGTCCCTGCAACTTGTTTTGAAGCTTGACGCACTAGTTGCAGATGCATACTATGAGCAGATTACACGGGAAGTCGGTTGCCTTGTGAAGGCAAATGCTTCTCGTATTAGATCTCAGTCTGGATGGCGGACTATTACAGCTCTGCTCTCAATCACTTCTAGACACCTGGAATCATCTGAGGCTGGATTTGATGCGCTGCTGTTCATTATGTCTGATGGTGCTCACTTGCACCCTGCTAATTACATTCTCTGTGTAGATGCTGCAAGACAGTTTGCCGAGTCTCGTGTGGGACAGGTAGATCGGTCTATAATTGCACTAGATCTTATGGCAAGTTCTGTCAATTCCTTAGAAAAATGGTCGAGTAATGCTAAAAAAACTGCGAAACAACAGGAAGTGGAAAAGATGTTGCAGGATATTGGGGAGATGTGGTTTACGCTAGTGCAGGGACTGAGCAAGGTATCTTTGGACCAGAGAGAGGAGGTTAGAAACCATGCATTGTTATGTTTGCAGAAGTGCTTGAAAGGAACTGTTGGGACTCACCTCCCACGTGATTTGTGGTTGACATGTTTTGATCAAGTGATCTTTACTGTGCTCGAAGACCTGCTTGAAATTGCGCAGTTGCATTCTCAAAAGGTCTACCCAAACATAGAAGGAACACTTGTTATTGCCTTAAAGCTTGTGTTTGAAGTTTTCCTCCAGTTACTCCTAGAACTATCACAATTGGCGTCCTTCTGCAAACTATGGGAGGGTGTTCTAAGCTGTATGGAAAAATGTGTGAAGATGAAAATTAAAGGAAGAAGAAGTGAGGAGCTTCAAGAGCTTGTGCCTGAGCTTCTGAAGTACACTTTGCTTGTTATGAAATCTGGAGACATACTAGTGCAGATTAATAATGGTTCGGGAGAAAATAGTTTGTGGGAACTGACATGGCTACATATGAAGAATATTGCTCCCTCATTGCAATCTGAGGTGTTTCCTGAGCAAGATCCGGAGCAGCTACAGCACAGACAGGTTAAAGCAGTTGAAAGTTTGGGATCTGATGCAAACATTTCCGATCCTTCAAATGAAAAAGAGGGCAACGATGTAGTTGAGATCAGTTAG 4503 0.4077 MQMQTDFNAVEDQYELCEAGYPNKTAIACMINAEISAVLAVMRRNVRWGIHYISDDDQSEHYLVQSLKTLRRQIFSWKNQWRAINPALYLQPFLDVIRSDETSAPITGVALSSVYKILTLDVIDKHTVKVGDTMHLVVDSVTSCRFEVTDPGSEEVVLMKILQVLLACVKGKASVMLSNQHVCTIVNTCFRIVHQAGTKGELFQRIARYTMHELVRSIFSHLQNIDNTKCGFINGSATLKQVVDCPKLIGKEGKMLAITYVNKVKSGGGAAGWGGVGTNGLNNDHALASRKLENERLNSARDAQPLSTITASGAAPVVAANAVDENTAIASSGNETDPHELLLMTHGVPCIVEIFHFLCSLLNVTEHMGVNPRSNTMTFDEDVPLFSLTLINSAIELGGPSFCHHPRLLCLIQDELFFNLMQFGLSMSPLVVSMVCSIVLNLYHHLRQELKLQLEAFFSCIILRLAQSKYGASYQQQEVVMEALVDFCRQKTFMVEMYANFDCDISCSDIFEDIVDLLSKSAFPVNNPLSSMHILSLDGLIAVMQGISERIGSESLSSKQSPVNFEEYTPFWMEKCDSFDDPNDWVPFVCQRKYIKRKLMIGADHFNRDIKKGLEFLQGAHLLPNKPDSQSVACFLRYTAGLDKNSIGDFLGDHDEFYIQVLHEFAKTFDFHDMTLDTALRVFLETFRLPGESQKIHRVLEAFSERYYEQSPDILANKDAALVLSYSIILLNTDHHNVQVKKKMTEEDFIRNNRHINGGNDLPREFLSEIYHSICKSEIRTTLEPGFGFPEMTPSRWISLMHEANKTSPYIVSDSRAYLDYDMFVLLSGPTIVAISVAFDNAENKEVYQRCMDGFLVAAKISAHYRLENVLDDLVVCICKFITILDPLSVEDSVLALGDDTKVRIATETVFTIANRYGDYIRTGWRSILDCILIFYKLGLLPPRLASDAADESQVTTEIGHGKSNSYSIVSSNLQYIAPKRSSGLISRFSQLLSLGSEDIQSIPTKEQLAAHQQATQAIQKCHIDSIFTESKFLQAESLLNLERALINAGAQHLKGNRIREDEESSVFCLELLVAITLNNRDRVVLLWKGVYEHISNIIQSTVIPCALVEKAIFGLLRICHRLLPYKENITDELLRSLQLVLKLDALVADAYYEQITREVGCLVKANASRIRSQSGWRTITALLSITSRHLESSEAGFDALLFIMSDGAHLHPANYILCVDAARQFAESRVGQVDRSIIALDLMASSVNSLEKWSSNAKKTAKQQEVEKMLQDIGEMWFTLVQGLSKVSLDQREEVRNHALLCLQKCLKGTVGTHLPRDLWLTCFDQVIFTVLEDLLEIAQLHSQKVYPNIEGTLVIALKLVFEVFLQLLLELSQLASFCKLWEGVLSCMEKCVKMKIKGRRSEELQELVPELLKYTLLVMKSGDILVQINNGSGENSLWELTWLHMKNIAPSLQSEVFPEQDPEQLQHRQVKAVESLGSDANISDPSNEKEGNDVVEIS 1500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02621 1500 Gene3D - 589 671 - -
Vian2g02621 1500 CDD Sec7 596 779 IPR000904 GO:0005085|GO:0032012
Vian2g02621 1500 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 70 1464 - -
Vian2g02621 1500 FunFam ARF guanine-nucleotide exchange factor GNOM 589 671 - -
Vian2g02621 1500 SMART sec7_5 592 779 IPR000904 GO:0005085|GO:0032012
Vian2g02621 1500 FunFam ARF guanine-nucleotide exchange factor GNOM-like 671 789 - -
Vian2g02621 1500 ProSiteProfiles SEC7 domain profile. 596 777 IPR000904 GO:0005085|GO:0032012
Vian2g02621 1500 Pfam Sec7 domain 596 779 IPR000904 GO:0005085|GO:0032012
Vian2g02621 1500 Pfam Guanine nucleotide exchange factor in Golgi transport N-terminal 349 510 IPR032691 -
Vian2g02621 1500 SUPERFAMILY Sec7 domain 592 782 IPR035999 GO:0005085|GO:0032012
Vian2g02621 1500 Gene3D - 672 786 IPR023394 -
Vian2g02621 1500 MobiDBLite consensus disorder prediction 1477 1500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02621 Vian-Chr2 46928127 46933157 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02621 K18443 - gmx:100802024 2402.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g01640 7 25702296 25715468 Vian2g02621 2 46928127 46933157 PCT