Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02600 ATGCAGAGCTACATTGTCTACACTGGCAATTCCATGAAGGATGAGGATTCTGCGTTGGCTCTTTATTCAAACATACTACAAGAAGTTGCAGACAGCAATGCCGATCCCAAGTCAGTGCAGCAGCACTACAAACGAAGTTTCGGTGGCTTTGTTGCTAAGCTAACGGAAGAGGAAGCCAATAGATTGGCTAGGCATGAAAGAGTGGTAGCTGTCTTTCCCAATCAAAAGAAGCAACTCCATACAACAAGGTCATGGGATTTCATTGGATTTCCACTAAACGTAGACAGAGCAAATACTGAGAGTGATGTCATCATTGGAGTGCTTGACTCTGGAATCTGGCCAGAATCTAAGAGCTTCAGTGACGAAGGATTCGGTCCACCACCTAGTAAATGGAAGGGCACTTGCCAAAGTTCTAAAAATTTCACGTGCAACAATAAAATCATTGGGGCTAAGATTTACAAAGCTGATGGATTCTTTACCGATGACGACCCAAAATCTCCGTTAGACGTAGATGGTCATGGCACTCATACAGCATCGACAGCAGCAGGGAATCCAGTTAGTCAAGCAAGCATGTTAGGCCTTGCTCAGGGAACGGCAAGAGGTGGCGCGATAAAAGCGCGCATTGCTGTGTATAAAGTGTGTTGGTTAGATGAAGGTTGTTCTGATGCAGACATACTTGCTGCATTTGATGATGCAATTGCGGATGGGGTTGACATAATATCAGTTTCTCTTGGAGGTTTCAGTGACGAAAACTACTTTAGAGATGGAATTGGCATCGGAGCATTTCATGCTGTGAGAAAAGGAGTGTTGACAGTAACTTCAGCAGGGAACAATGGTCCAAAATATTCCTCCCTGTCCAATTTTTTGCCTTGGTCAATTACTGTGGCTGCGACTACCATAGACAGAAAGTTTGTTACCAAGGTTGGATTAGGTAACAACATTACCTATGAGGGTACCTCGATAAATACATTTGACCTCAAGGGAGAGTTGTATCCTATAATCTATGGTGGAGATGCACCAAGCAAAGGCTCCGATTCATCGTCATCAAGGTTTTGCTTCAGCGGTTCGTTGGACAAAAAATTAGTGGAGGGTAAAATTGTTCTGTGTGATAGCAGAAGCATAGCGACAGGCCCTTTCAATGCCGGTTCTGTTGGGGCATTGATACAAGGTCAAAGTTCTAGAGATCTTCCTCCTAGTCTTCCATTACCTGGATCTTACCTCGAATTGAAGGATGGTGCCTCTGTACTCGACTACATAAACTCCACGAGGACTCCAACTGCAACCATATTTAAGACTGATGTGACAGATGATACAATAGCCCCTGTTGTGGCCTCTTTCTCTTCAAGGGGTCCAAACATTGTTACACCCGAAGTTCTCAAGCCGGATTTAGTGGCTCCTGGAGTAGCCATTTTAGCTAGTTGGTCTCCAGTTTCTCCTCCTTCTGATGTTGACGGTGACAACAGAACATTAAACTTCAACATCATTTCCGGAACTTCAATGTCTTGTCCACATGTTTCTGGGGCAGCGGCATATGTGAAATCATTCCACCCAACATGGTCTCCTGCAGCTATTCGTTCAGCTCTAATGACAACAGCTAAACAACTTAGTCCAAAGATTAACCTTTACGCAGAACTGTCATATGGGGCAGGCCAAATTGATCCTTCGAAGGCTGTGTGCCCTGGTTTAGTATATGATGCTGGTGAAATAGACTATGTAAGGTTCTTATGTGGACAAGGGTATAGTTCAAGGAATTTACAACTCATAACAGGAGACAACAGTAGCTGCTCCGAAGCAAGTTCAGCAAGGGATCTAAACTATCCCTCATTTGCACTTTTTTCCCCGATCTCCAAGTCGAATGGAGTAAGTGGGAGTTTTAACAGGACTGTTACAAATGTTGGGTCAGCAACGTCGACGTATAAAGCTAAGGTGATCGGTCCTGCAGGACTAAAAATTGAAGCGAACCCGAGTGTTTTGTCATTCAGTTCTCTTAACCAAAAGCTCTCATTTGTGCTCACCATTGAGGGAACTATGAAGGAACCTATAGAATCAGCCTCTTTGACTTGGGATGATGGTGAATTCCAAGTGAGGAGCCCCATTGTTGTGTTTAACACAGTATAA 2118 0.4396 MQSYIVYTGNSMKDEDSALALYSNILQEVADSNADPKSVQQHYKRSFGGFVAKLTEEEANRLARHERVVAVFPNQKKQLHTTRSWDFIGFPLNVDRANTESDVIIGVLDSGIWPESKSFSDEGFGPPPSKWKGTCQSSKNFTCNNKIIGAKIYKADGFFTDDDPKSPLDVDGHGTHTASTAAGNPVSQASMLGLAQGTARGGAIKARIAVYKVCWLDEGCSDADILAAFDDAIADGVDIISVSLGGFSDENYFRDGIGIGAFHAVRKGVLTVTSAGNNGPKYSSLSNFLPWSITVAATTIDRKFVTKVGLGNNITYEGTSINTFDLKGELYPIIYGGDAPSKGSDSSSSRFCFSGSLDKKLVEGKIVLCDSRSIATGPFNAGSVGALIQGQSSRDLPPSLPLPGSYLELKDGASVLDYINSTRTPTATIFKTDVTDDTIAPVVASFSSRGPNIVTPEVLKPDLVAPGVAILASWSPVSPPSDVDGDNRTLNFNIISGTSMSCPHVSGAAAYVKSFHPTWSPAAIRSALMTTAKQLSPKINLYAELSYGAGQIDPSKAVCPGLVYDAGEIDYVRFLCGQGYSSRNLQLITGDNSSCSEASSARDLNYPSFALFSPISKSNGVSGSFNRTVTNVGSATSTYKAKVIGPAGLKIEANPSVLSFSSLNQKLSFVLTIEGTMKEPIESASLTWDDGEFQVRSPIVVFNTV 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02600 705 SUPERFAMILY Subtilisin-like 79 561 IPR036852 GO:0004252|GO:0006508
Vian2g02600 705 FunFam Subtilisin-like protease SBT1.5 102 312 - -
Vian2g02600 705 CDD Peptidases_S8_3 77 532 IPR034197 -
Vian2g02600 705 Pfam Fibronectin type-III domain 603 701 IPR041469 -
Vian2g02600 705 ProSitePatterns Serine proteases, subtilase family, serine active site. 497 507 IPR023828 -
Vian2g02600 705 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 4 701 IPR045051 -
Vian2g02600 705 Gene3D Peptidase S8/S53 domain 102 571 IPR036852 GO:0004252|GO:0006508
Vian2g02600 705 Pfam Peptidase inhibitor I9 3 80 IPR010259 -
Vian2g02600 705 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 80 IPR037045 -
Vian2g02600 705 CDD PA_subtilisin_like 308 429 - -
Vian2g02600 705 PRINTS Subtilisin serine protease family (S8) signature 496 512 IPR015500 -
Vian2g02600 705 PRINTS Subtilisin serine protease family (S8) signature 169 182 IPR015500 -
Vian2g02600 705 PRINTS Subtilisin serine protease family (S8) signature 100 119 IPR015500 -
Vian2g02600 705 ProSiteProfiles Serine proteases, subtilase domain profile. 84 558 - -
Vian2g02600 705 Gene3D - 575 703 - -
Vian2g02600 705 Pfam Subtilase family 101 539 IPR000209 GO:0006508|GO:0008236
Vian2g02600 705 Gene3D - 301 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02600 Vian-Chr2 46725505 46729148 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02600 2 702 Subtilisin-like Serine Gene Family AT3G46850 49.028 0.0 637
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02600 - - gmx:100795826 1137.87