Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02574 ATGTTATCTACAACAATGCCTTCTTCTTCTTCTTCTTCTTTCTCTTCCGATGATGCAATCACTGTCCTCTCAAAATGCACTGTTCTGCCTCACCAAAATTCCACTCTAGGTGATCTCAAGCTCTCTATATCTGACCTTAACATGCTTCTCTCTCACTACATTCAAAAGGGCTGTCTCTTCACCACCCCATCTCTCCCCTCTCACACTCTCATCCCTCACCTCATCAACGCGCTTTCTCACACACTCTCCCTTTTCCCTCCCTTCGCTGGCCGTCTCAAAACTGACCATCACGGCTACGTCTACATCGCATGCAACGATGCTGGCGTCGACTTCATCCACGCCACCGCCGATCATATCTCCGTTACCGACCTCCTGCTTCCTTCCCATCTTCATCCAACCCTCAACCACCTCTTTCCTTTCCACCACAAAATTAGTTACACCGCTCATTCCTCCCCTATCATGGCCTTTCAGGTCACCGAGCTCGTTGACGGCCTTTTCATCGGTTGTGCTGTCTGCCACGCTGTCACCGACGGAGCCTCCTTCTGGAACTTCTTTAACACCTTCGCTTCACTTTCTAAAGGAGTAACCATATGTCCCTCCAGGCCTCCGGATTTTCGTCGGGATTCCATCCTCACCTCCAAAATTCTGCTTCGGCTGCCAAAAGAAATCAAGGTGACCTTCAACGTTGACGCACCCTTTCGCGAGAGAATCTTCAGCTTCAGCCGTGAGTCAATTCAGAAGCTGAAAGCCGTAGTGAATAATGGTGGGAAAATTTATTGGTTGGAGAATGTTGAGTTGATGGGAAAGCTGAGCCACGATACACAAGCGAAAACGACGGAGATTTCATCGTTTCAATCGTTGTGCGCGCTGATGTGGCGGTCCGTTACAAAGGCGAGGAATCTGGAAGGGAGTAAAGTGACGACGTTTCGAATGGCAGTCAATGTTCGACATCGCATGGAGCCCAAGTTGGGAGACCATTACTTTGGAAACGCGATTCAGAGCATTGCCACGTGTGCAGAAGCGGGTGACGTGGTGTCTAGCGAGCTTGGATGGTGCGCGGAGCAACTGAACAAAAGCGTAAAGGCGTTCGACAGTGCCACAGTGTGCCGCAACGTGGAGAATTGGGAGCAATTCTCAGTATTATAA 1146 0.4983 MLSTTMPSSSSSSFSSDDAITVLSKCTVLPHQNSTLGDLKLSISDLNMLLSHYIQKGCLFTTPSLPSHTLIPHLINALSHTLSLFPPFAGRLKTDHHGYVYIACNDAGVDFIHATADHISVTDLLLPSHLHPTLNHLFPFHHKISYTAHSSPIMAFQVTELVDGLFIGCAVCHAVTDGASFWNFFNTFASLSKGVTICPSRPPDFRRDSILTSKILLRLPKEIKVTFNVDAPFRERIFSFSRESIQKLKAVVNNGGKIYWLENVELMGKLSHDTQAKTTEISSFQSLCALMWRSVTKARNLEGSKVTTFRMAVNVRHRMEPKLGDHYFGNAIQSIATCAEAGDVVSSELGWCAEQLNKSVKAFDSATVCRNVENWEQFSVL 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02574 381 Pfam Transferase family 20 377 - -
Vian2g02574 381 Gene3D - 223 380 IPR023213 -
Vian2g02574 381 Gene3D - 20 222 IPR023213 -
Vian2g02574 381 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 22 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02574 Vian-Chr2 46438101 46440565 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02574 44 364 Monolignol Biosynthesis Gene Families AT5G48930 29.518 1.20e-27 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02574 - - gmx:100792476 561.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02574 2 46438101 46440565 Vian7g01592 7 24906841 24911419 PCT