Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02552 ATGACGGCATGGCTGGTGGTGCTACTCGCAGATCAAAAGGAACTAAGGAAGCTCCAACACGAGGGAGAAGGATTCTTCAAGAAAATACTGCAATTCGCTGCCAATGTCAGGGTCGTTGTTAAAGTCGTTGGTGCTGCTTCCCTTTTCCTCCTCAACGCATCCTCTTCCCCAATCCCTAGGGTTTCACAAGCCACCATGGATCTCCCTTCCCAAGTCGTGAAGCCATGGCGCTGCAACCTCACCTTTTCCTTCGTGTCAGAGTCGAACGTTATCGCCAACGTTACTACACCTCTGCCATGCTGTGTTATGATTGAAGATGTTGGATTGAGAATTAGGTTTGTGATGTTGAACATTGGAGTGGATGAAGAAGAGGTGTTGGTGAAGATGGAAATATTAATAAAGAAGAGCTGCTTCACGGGTCGGTCATCTGAACAAGAGAGATTGACTGTGGAGTTTTGGCGGGAAGCTGACATTCTTTCCAAGCTTCATCATCCAAATGTGGTTGCATTTTATGGTGTGGTACAGCATGGACCAGGTGGTTCAATGGCCACTGTGGCAGAATATATGGTGGATGGTTCTCATAGGCATGTATATCTTGATCGTCGGAAGAGGCTGATAATTGCAATGGATGCTGCTTTTGGAATGGAATATTTGCACTCGAAAAACATTGTGCATTTTGACTTAAAATGTGACAATTTGCTTGTAAACTTGAAAGATCCTTTACGTCCAATACGCAAGGTTGGTGATTTTGGCTTATCAAAAATTAAGAGAAATACTTTGGTTACTGGTGTGCGTGGGACACACTACCTTGAATGGCACCAGCTTCTGAATGGCCGCAGCAATAAGGTCTCAGAAAAGGTTGATGTGTTCTCCATTAGCATTGTATTATGGGAAATTCTTATTATGTGTAACGCAAACACAAAGCACGTTGGTTCCTATTTGGTCAAAACATTAAAGGTGGCCACATCGATCCCTCCATTGCTATAG 987 0.4397 MTAWLVVLLADQKELRKLQHEGEGFFKKILQFAANVRVVVKVVGAASLFLLNASSSPIPRVSQATMDLPSQVVKPWRCNLTFSFVSESNVIANVTTPLPCCVMIEDVGLRIRFVMLNIGVDEEEVLVKMEILIKKSCFTGRSSEQERLTVEFWREADILSKLHHPNVVAFYGVVQHGPGGSMATVAEYMVDGSHRHVYLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPLRPIRKVGDFGLSKIKRNTLVTGVRGTHYLEWHQLLNGRSNKVSEKVDVFSISIVLWEILIMCNANTKHVGSYLVKTLKVATSIPPLL 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02552 328 SUPERFAMILY Protein kinase-like (PK-like) 125 306 IPR011009 -
Vian2g02552 328 Gene3D Transferase(Phosphotransferase) domain 1 120 320 - -
Vian2g02552 328 SMART serkin_6 108 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian2g02552 328 PANTHER SERINE-THREONINE PROTEIN KINASE 128 300 - -
Vian2g02552 328 Pfam Protein tyrosine and serine/threonine kinase 128 310 IPR001245 GO:0004672|GO:0006468
Vian2g02552 328 ProSiteProfiles Protein kinase domain profile. 15 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian2g02552 328 ProSitePatterns Serine/Threonine protein kinases active-site signature. 223 235 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02552 Vian-Chr2 46174592 46175941 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02552 133 301 MAP Kinase Kinase Kinase AT1G16270 80.337 7.02e-87 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Vian2g02552 PK_Tyr_Ser-Thr 3.7e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02552 - - vum:124838453 545.814