Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02537 ATGTCTGCCTCCAGAAAGAAGCTTCTTCTCAACACAGTGTCCGTGAAACTTGGCTGCGGCACCTGCAGAGGGCCAAAACTCTATCGCATATTCCATCCAAAGCCTAAACCCAAGAAGCTCCCCTCTTACCAAAACCACAAAAACCACTACAACCATTTCTCTTCTTCCTCTTCTTCAGCCCAATGGGCTGACAGCACCAACACCACCCCCACCAACACCAACACCAACACCACATTCTCTCCCTACGTTGATTCCTCCCACTTTTCTGACTCCGACGTCAAGGCTGCAAGAACAATGGGGGGTTTGGGAAGAGCTGGCAAAGAAGGGGTGGCGGTGGAGAAAGACTCCGATGACCCTTATCTTGACTTCAGACATTCCATGCTGCAAATGATATTGGAGAACGAGATATACTCCAAGCAAGATCTCAGAGACCTTCTCAGTTGCTTCCTTCAGCTCAATTCACCGCACCATCATGGCGTTATAGTCAGGGCTTTCACTGAGATCTGGAATGGCGTCTTCTCTGGCAGACCCAATTCACACATCAACCGTAAGCCACGTCAGTTCTAA 567 0.4938 MSASRKKLLLNTVSVKLGCGTCRGPKLYRIFHPKPKPKKLPSYQNHKNHYNHFSSSSSSAQWADSTNTTPTNTNTNTTFSPYVDSSHFSDSDVKAARTMGGLGRAGKEGVAVEKDSDDPYLDFRHSMLQMILENEIYSKQDLRDLLSCFLQLNSPHHHGVIVRAFTEIWNGVFSGRPNSHINRKPRQF 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02537 188 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 45 174 IPR038933 GO:0045892
Vian2g02537 188 NCBIfam uncharacterized plant-specific domain TIGR01568 110 170 IPR006458 -
Vian2g02537 188 ProSiteProfiles OVATE domain profile. 112 171 IPR006458 -
Vian2g02537 188 MobiDBLite consensus disorder prediction 33 81 - -
Vian2g02537 188 Pfam Transcriptional repressor, ovate 116 172 IPR006458 -
Vian2g02537 188 MobiDBLite consensus disorder prediction 46 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02537 Vian-Chr2 46044483 46045049 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Vian2g02537 Ovate 1.6e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02537 - - gmx:100804319 273.092