Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02536 ATGGGCAAGAAAATGAAGCTTCCTTCCCTTCTCCACAACAAGAACTCACACCCCAAACCTTCTTCCACTTCCTGGCCATGGCCCTCTTGCCACCAACCTCGAACCCTCTCTTTTCGAGACCAAAACGATGTCGCTTTCAAAACCATCAACCCAGCCTACTTCGACATGCCCGAGAGCTCCCACTCCTTCTTCACTGTCTCTCCTGACTCTGGAAGCTTCTCTACCGCTTCAGAAGAAGATTCTAGAAGACCGGATTCCCTTGAGACCCTCATTCGCCCCTTGCCTTCCGACCGTTTGTTCTTCCACCCCGACCAGACAAGCTCCATATTAGAGTCCAAAGCAGGAACATCAACACCAACACCAACACCAACACAAACACAAACAACTACAACACCAACAACAACGTTGCCCTTCAAAGACAGCGTGGTTATGTCTGTGGAGTCTCAGGACCCTTACGTGGACTTCCTCAGGTCCATGGAAGAGATGGTGGAAGCCCAGTGCGTTAAAGACTTTGATGGTCTCCAAGAGCTTTTATGTTGGTATTTGAAAGTCAATGGAAAAAGCAACCATGGTTATATTGTTGGTGCTTTCATTGATCTATTGGTGGCTTTTTCTGATATAAACTCTCATTCTCCTTCTTCCCCTTTGTCATTCTACAGCTCTTCTCTTTCTTCCTCTTGCAGCACTCACTGTGTTTCATGTTTGGAAGCTGAGGACGAGGTTGATACAGCTACCCCTAATTCTTCTTTCTTGTTAGAACAAGTTAGGGAAGACCAGTCTTCATCTTCTTCATCCTCTTTGAATTAA 807 0.4622 MGKKMKLPSLLHNKNSHPKPSSTSWPWPSCHQPRTLSFRDQNDVAFKTINPAYFDMPESSHSFFTVSPDSGSFSTASEEDSRRPDSLETLIRPLPSDRLFFHPDQTSSILESKAGTSTPTPTPTQTQTTTTPTTTLPFKDSVVMSVESQDPYVDFLRSMEEMVEAQCVKDFDGLQELLCWYLKVNGKSNHGYIVGAFIDLLVAFSDINSHSPSSPLSFYSSSLSSSCSTHCVSCLEAEDEVDTATPNSSFLLEQVREDQSSSSSSSLN 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02536 268 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 41 204 IPR038933 GO:0045892
Vian2g02536 268 NCBIfam uncharacterized plant-specific domain TIGR01568 142 204 IPR006458 -
Vian2g02536 268 Pfam Transcriptional repressor, ovate 148 203 IPR006458 -
Vian2g02536 268 MobiDBLite consensus disorder prediction 14 28 - -
Vian2g02536 268 MobiDBLite consensus disorder prediction 110 136 - -
Vian2g02536 268 MobiDBLite consensus disorder prediction 1 28 - -
Vian2g02536 268 ProSiteProfiles OVATE domain profile. 142 203 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02536 Vian-Chr2 46028234 46029040 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Vian2g02536 Ovate 6e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02536 - - vum:124838078 419.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02536 2 46028234 46029040 Vian3g00230 3 2017598 2018335 ECH
Vian2g02536 2 46028234 46029040 Vian2g02536 2 46028234 46029040 ECH