Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02512 ATGTTAGGGAAAAAGATGGTATCTTTCAAGAAACTGGCAAAAAGGGTGAAGGGGGTAGGTGGATTTGAGCCTGATCCTTACCCTGCTCATCATGAGGGTTTGCTCAATAACTATGAAGAAAAATGTGTGACTAACTCACCCCCGACAGGGTTTTTTGCTCTTTATGTCGGAGAAGAGCGGCAAAGATACGTGGTTCCAACGCGCTACCTTTCTCACCCCTTGTTCAAGATGCTGCTGGAGAAGACTTACAATGAGTTTGGATTTTCGCAGAGGAATGGACTAGTAGTTCCATGCAGTGTTTCCACGTTTGAGGAGGTTCTGAATGCCATAGAATGCAACAACGGCAAGTTTGACTTGGGAAAGTTTTTTGCAGAGTTTGTTTGA 384 0.4427 MLGKKMVSFKKLAKRVKGVGGFEPDPYPAHHEGLLNNYEEKCVTNSPPTGFFALYVGEERQRYVVPTRYLSHPLFKMLLEKTYNEFGFSQRNGLVVPCSVSTFEEVLNAIECNNGKFDLGKFFAEFV 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02512 127 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 41 106 IPR003676 GO:0009733
Vian2g02512 127 Pfam Auxin responsive protein 40 109 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02512 Vian-Chr2 45764674 45765057 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02512 36 113 Calmodulin-binding Proteins AT5G20810 47.561 1.27e-20 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02512 K14488 - gmx:100776885 233.032