Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02496 ATGGAAACTGTTGCTAGAAGAAGAGGTGGAGGAATTTTCGAAAGCCTTTACAAGGTTGTTATGCGTCGCAATTCTGTCTATGTTACCTTTGTCATCGCTGGCGCCTTCCTCGGAGAACGGGCTGTTGATTATGGAATCCACAAGCTCTGGGAGGCTAATAATGTTGGGGAGAAGATGGAAAGCGGTGAGGAACAGAAGTACGGAGTTCGGAAATTAGAGATCTCAGACAAGAGCAAAGGCTTCATCGAGTTGCTGCAGCAACTCAGCGTTTGCGATTCCGTCTCTGACAGAGACTTCGAGGATCGATTTCGAGAGCTCAGTGCCGTTGGAGATGATCACGTTATCGGCGTGATTGAAGACGAGGCTTCTGGAAAGATCATTGCGACGGGGAGCGTGTTTATTGAGAAGAAATTTTTGAGAAATTGCGGCAAAGTTGGGCACATTGAGGACGTTGTTGTGGATTCCAGCGCTCGTGGGAAGCATTTGGGAAAGAGAATCATCAGCTTCCTGACGGAGCATGCGCGTTCCATGGGATGCTATAAGGTCATTCTTGATTGCAGCCTCGATAATAAGGCGTTCTACGAGAAATGTGGCTTCCAGCATAAATCTCTTCAGATGGCTATGTATTTTGCTCACCACTAG 642 0.4735 METVARRRGGGIFESLYKVVMRRNSVYVTFVIAGAFLGERAVDYGIHKLWEANNVGEKMESGEEQKYGVRKLEISDKSKGFIELLQQLSVCDSVSDRDFEDRFRELSAVGDDHVIGVIEDEASGKIIATGSVFIEKKFLRNCGKVGHIEDVVVDSSARGKHLGKRIISFLTEHARSMGCYKVILDCSLDNKAFYEKCGFQHKSLQMAMYFAHH 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02496 213 Pfam Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like 15 56 IPR008027 GO:0005750|GO:0006122
Vian2g02496 213 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 80 210 IPR016181 -
Vian2g02496 213 Gene3D - 64 211 - -
Vian2g02496 213 Pfam Acetyltransferase (GNAT) family 96 199 IPR000182 GO:0016747
Vian2g02496 213 FunFam cytochrome b-c1 complex subunit 9 10 62 - -
Vian2g02496 213 Gene3D - 11 60 IPR036656 GO:0005750|GO:0006122
Vian2g02496 213 PANTHER GLUCOSAMINE 6-PHOSPHATE N-ACETYLTRANSFERASE 60 206 IPR039143 GO:0004343|GO:0006048
Vian2g02496 213 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 67 213 IPR000182 GO:0016747
Vian2g02496 213 CDD NAT_SF 117 185 - -
Vian2g02496 213 FunFam Glucosamine 6-phosphate N-acetyltransferase 51 207 - -
Vian2g02496 213 SUPERFAMILY Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 12 57 IPR036656 GO:0005750|GO:0006122
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02496 Vian-Chr2 45650614 45655014 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vian2g02496 Acetyltransf_1 2.3e-16 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02496 K00621 - gmx:100499668 277.33