Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vian2g02496 | ATGGAAACTGTTGCTAGAAGAAGAGGTGGAGGAATTTTCGAAAGCCTTTACAAGGTTGTTATGCGTCGCAATTCTGTCTATGTTACCTTTGTCATCGCTGGCGCCTTCCTCGGAGAACGGGCTGTTGATTATGGAATCCACAAGCTCTGGGAGGCTAATAATGTTGGGGAGAAGATGGAAAGCGGTGAGGAACAGAAGTACGGAGTTCGGAAATTAGAGATCTCAGACAAGAGCAAAGGCTTCATCGAGTTGCTGCAGCAACTCAGCGTTTGCGATTCCGTCTCTGACAGAGACTTCGAGGATCGATTTCGAGAGCTCAGTGCCGTTGGAGATGATCACGTTATCGGCGTGATTGAAGACGAGGCTTCTGGAAAGATCATTGCGACGGGGAGCGTGTTTATTGAGAAGAAATTTTTGAGAAATTGCGGCAAAGTTGGGCACATTGAGGACGTTGTTGTGGATTCCAGCGCTCGTGGGAAGCATTTGGGAAAGAGAATCATCAGCTTCCTGACGGAGCATGCGCGTTCCATGGGATGCTATAAGGTCATTCTTGATTGCAGCCTCGATAATAAGGCGTTCTACGAGAAATGTGGCTTCCAGCATAAATCTCTTCAGATGGCTATGTATTTTGCTCACCACTAG | 642 | 0.4735 | METVARRRGGGIFESLYKVVMRRNSVYVTFVIAGAFLGERAVDYGIHKLWEANNVGEKMESGEEQKYGVRKLEISDKSKGFIELLQQLSVCDSVSDRDFEDRFRELSAVGDDHVIGVIEDEASGKIIATGSVFIEKKFLRNCGKVGHIEDVVVDSSARGKHLGKRIISFLTEHARSMGCYKVILDCSLDNKAFYEKCGFQHKSLQMAMYFAHH | 213 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vian2g02496 | 213 | Pfam | Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like | 15 | 56 | IPR008027 | GO:0005750|GO:0006122 | |
Vian2g02496 | 213 | SUPERFAMILY | Acyl-CoA N-acyltransferases (Nat) | 80 | 210 | IPR016181 | - | |
Vian2g02496 | 213 | Gene3D | - | 64 | 211 | - | - | |
Vian2g02496 | 213 | Pfam | Acetyltransferase (GNAT) family | 96 | 199 | IPR000182 | GO:0016747 | |
Vian2g02496 | 213 | FunFam | cytochrome b-c1 complex subunit 9 | 10 | 62 | - | - | |
Vian2g02496 | 213 | Gene3D | - | 11 | 60 | IPR036656 | GO:0005750|GO:0006122 | |
Vian2g02496 | 213 | PANTHER | GLUCOSAMINE 6-PHOSPHATE N-ACETYLTRANSFERASE | 60 | 206 | IPR039143 | GO:0004343|GO:0006048 | |
Vian2g02496 | 213 | ProSiteProfiles | Gcn5-related N-acetyltransferase (GNAT) domain profile. | 67 | 213 | IPR000182 | GO:0016747 | |
Vian2g02496 | 213 | CDD | NAT_SF | 117 | 185 | - | - | |
Vian2g02496 | 213 | FunFam | Glucosamine 6-phosphate N-acetyltransferase | 51 | 207 | - | - | |
Vian2g02496 | 213 | SUPERFAMILY | Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | 12 | 57 | IPR036656 | GO:0005750|GO:0006122 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vian2g02496 | Vian-Chr2 | 45650614 | 45655014 | Proximal |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | GNAT | Vian2g02496 | Acetyltransf_1 | 2.3e-16 | CL0257 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vian2g02496 | K00621 | - | gmx:100499668 | 277.33 |