Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02488 ATGGTGGTTGAAGAGGGTGAGATGAATTCCCAAGGTGAGGCGGAATCAAGATTCCAACAAGATGCGAACAAGAACCACCATTCTCAGTTCCCACCATCATCCATTGGAAGAGAAACATCCATATATTCTCTTACACTGGACGAGTTCCAGCACAGTCTATGCGAGACCGGCAAAAACTTCGGTTCCATGAACATGGACGAGTTTATCAGCAGCGTCTGGAACGCAGAAGAGAATCAAGCCATAATAACCTCTTCCAATCTCCCTCTCTCCCAACCCTTCACTGACAAAGATCCAACAACTCTAAGGAAACAACCAAGCCTCCCTCGCCAACCCTCACTCTCTCTCCCTGCACCTCTATGCAGGAAAACCGTGGATGAAGTTTGGTCCCAGATTCAGAAAGAACAACACGACAGCACTAACAACAACGAAGTTTTGGATAATACCGAGTCTGCCCCTCGCCAGCCCACTTTCGGTGAGATGACTTTGGAGGACTTTTTGGTCAAGGCTGGGGTGGTTCGAGAACAACCATGTGCACCACCACAGTTGTCTCATCACTCTCACCACCTCCAACACCAGCAGCAGCCGCAGCCGCAGCCGCAGCAGCAGCATTACACGAGTAACAACGGTGCAATGCCGGGAATGGGTTCTCCTTTTGTTGGAAGGAATGTTATTGGTGCAGTGAGTAACGTGGTTGCACCGGGTTACCAAGTGGGGGAGGCTTCTGGTGGGTATGCTGTAAACGGTAAGAGGGACGGTGGTGCGGTGTTTCATCAGCAAGGTGTTTCCTTTGGAGGAAGTGGGTATGGGATGGGTCCCACGATGGGAATGGGTGGACCTGTGAGTCCTGCTAATTCTTCTGATGGAATAGGGAATGATTGTGGGCAGTTTGGGCTTGAGATGGGTGGTTTGAGAGGTAGAAAGAGGATAGGGGATGGTCCTGTGGAAAAGGTGGTGGAGAGGAGGCAAAGGAGAATGATCAAGAATAGAGAGTCAGCTGCCAGATCTAGAGCCAGAAAACAGGCATACACGGTTGAATTAGAAGCGGAACTAAACCAACTAAAAGAAGAGAACGCCCAACTGAGACAGGCGCTGGCTGAGCTCGAGAGAAGAAGAAAGCAACAGCAGATTTTTGAAGAATTAAGCAATATTAGCGTTCAAACCAACGCTCAGAAAGTAAAAGAGAAAGATAAACTGAGAGCTTTGAGAAGGTACATGAGTTATCCTTAG 1227 0.4882 MVVEEGEMNSQGEAESRFQQDANKNHHSQFPPSSIGRETSIYSLTLDEFQHSLCETGKNFGSMNMDEFISSVWNAEENQAIITSSNLPLSQPFTDKDPTTLRKQPSLPRQPSLSLPAPLCRKTVDEVWSQIQKEQHDSTNNNEVLDNTESAPRQPTFGEMTLEDFLVKAGVVREQPCAPPQLSHHSHHLQHQQQPQPQPQQQHYTSNNGAMPGMGSPFVGRNVIGAVSNVVAPGYQVGEASGGYAVNGKRDGGAVFHQQGVSFGGSGYGMGPTMGMGGPVSPANSSDGIGNDCGQFGLEMGGLRGRKRIGDGPVEKVVERRQRRMIKNRESAARSRARKQAYTVELEAELNQLKEENAQLRQALAELERRRKQQQIFEELSNISVQTNAQKVKEKDKLRALRRYMSYP 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02488 408 SUPERFAMILY Leucine zipper domain 320 370 IPR046347 GO:0003700|GO:0006355
Vian2g02488 408 Gene3D - 318 374 - -
Vian2g02488 408 Coils Coil 336 377 - -
Vian2g02488 408 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 37 375 IPR043452 GO:0003700|GO:0045893
Vian2g02488 408 MobiDBLite consensus disorder prediction 130 156 - -
Vian2g02488 408 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 323 338 IPR004827 GO:0003700|GO:0006355
Vian2g02488 408 MobiDBLite consensus disorder prediction 87 116 - -
Vian2g02488 408 SMART brlzneu 316 379 IPR004827 GO:0003700|GO:0006355
Vian2g02488 408 CDD bZIP_plant_BZIP46 320 374 - -
Vian2g02488 408 MobiDBLite consensus disorder prediction 133 155 - -
Vian2g02488 408 MobiDBLite consensus disorder prediction 185 212 - -
Vian2g02488 408 MobiDBLite consensus disorder prediction 1 36 - -
Vian2g02488 408 Pfam bZIP transcription factor 320 372 IPR004827 GO:0003700|GO:0006355
Vian2g02488 408 MobiDBLite consensus disorder prediction 12 36 - -
Vian2g02488 408 MobiDBLite consensus disorder prediction 87 110 - -
Vian2g02488 408 MobiDBLite consensus disorder prediction 177 214 - -
Vian2g02488 408 FunFam protein ABSCISIC ACID-INSENSITIVE 5 isoform X1 318 374 - -
Vian2g02488 408 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 318 370 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02488 Vian-Chr2 45587027 45589025 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02488 1 374 bZIP Transcription Factor Family AT2G36270 48.736 1.40e-100 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vian2g02488 bZIP_1 6.4e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02488 K14432 - gmx:100818567 480.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02488 2 45587027 45589025 Vian2g02488 2 45587027 45589025 ECH
Vian2g02488 2 45587027 45589025 Vian3g02217 3 33288237 33290667 PCT