Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02478 ATGAACTTCAACAAGCAGCTTTTTCTTCTTCTCAATCTTTTCTCGGTTCTACTTCTTTCAGGAGAAAGAGTGTTGCAAGCAGAGGCTGGCCATCGTCATCATCACCATCACCATCATGGTCCAACAAAGTTGTTCGTTTTCGGAGACTCATATGCTGACACAGGCAACATTCAGAAAGCTGTTTCAAGCTCATGGAAAGACCCTTATGGCATCACCTTTCCCGGCAAGCCCGCCGGCAGATTTTCCGACGGTAGAGTCCTCACCGATTACATTGCTAAGTATTTGAAAGTGAAATCACCAATTCCCTACAGATATAGAAAACTGATGCCACAACATGTAAAATATGGGATGAACTTTGCTTTTGGAGGTACCGGTGTTTTCAACACGTCGGTTCCACTTCCAAACATGACAAACCAGATAGATTTCTTGCAACAGCTCATCAAAGACAAAGTCTACTCTGCCTTAGATCTCACCAACTCAGTTGCCCTTGTTTCTGTCGCTGGAAATGACTACAGTCATTTCTTGCAAACAAATGGTTCTGAGGGTTTATCATCTTTCGTGGCTTCAGTGATTAATCAAACAACGACGAATCTGATTCGCATAAGAGAGCTGGGAGTGAAGAAAGTAGTGGTGGGTGCTCTGCAACCCATTGGATGCCTTCCACAGATCACAGTCTCAATCTCATTCCAACGTTGCAATGAAACCCCCAACGCCCTCGTGCTTCTCCACAACACACTCTTGAACGAAGCAGTGACCACGTTAAACCAACAAACCAAGGAGCGTTCCACGTTCCGAATTCTTAACCTCTTCGACAGCTTCATGTCGGTGTTGAACCACCCTTCCACACACAACATTCGGGACAGGTTGAAGCCATGTTGTGTTGGTGTGAGCAGTAACTACTCGTGCGGGAGTGTGGACAACAATGTTAAGAAATATAGGGTATGCGATGATCCCAAATCTGCTTTCTTTTGGGATTTTGTGCACCCTACACAAGCTGGATGGCATGCAGTGTACAACAAGTTGCGAACCATGAATGAACTTCAACGGATTCTTTACTAG 1059 0.4495 MNFNKQLFLLLNLFSVLLLSGERVLQAEAGHRHHHHHHHGPTKLFVFGDSYADTGNIQKAVSSSWKDPYGITFPGKPAGRFSDGRVLTDYIAKYLKVKSPIPYRYRKLMPQHVKYGMNFAFGGTGVFNTSVPLPNMTNQIDFLQQLIKDKVYSALDLTNSVALVSVAGNDYSHFLQTNGSEGLSSFVASVINQTTTNLIRIRELGVKKVVVGALQPIGCLPQITVSISFQRCNETPNALVLLHNTLLNEAVTTLNQQTKERSTFRILNLFDSFMSVLNHPSTHNIRDRLKPCCVGVSSNYSCGSVDNNVKKYRVCDDPKSAFFWDFVHPTQAGWHAVYNKLRTMNELQRILY 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02478 352 Gene3D SGNH hydrolase 29 348 IPR036514 -
Vian2g02478 352 SUPERFAMILY SGNH hydrolase 40 341 - -
Vian2g02478 352 CDD SGNH_plant_lipase_like 44 341 IPR035669 -
Vian2g02478 352 PANTHER OSJNBB0059K02.9 PROTEIN 14 348 - -
Vian2g02478 352 Pfam GDSL-like Lipase/Acylhydrolase 44 340 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02478 Vian-Chr2 45465123 45468077 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02478 3 337 Pollen Coat Proteome AT1G75930 25.762 2.21e-26 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02478 - - gmx:100818373 567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02478 2 45465123 45468077 Vian2g02478 2 45465123 45468077 ECH
Vian2g02478 2 45465123 45468077 Vian3g02203 3 32967423 32976330 PCT