Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vian2g02476 | ATGGATGCTGAATCGGAGAAGCGCGCATTCACCTCCACTTCCGTTTCTAGGTCCTCTTCCTGTGAAGGTATGGATCGGCTTGTTGACAAGGAGGAGATGGAAGCGGCAGAGACTCTCGCACAGTTGGCAATGCGTGATTCTCACTCTACTGACAAATGGTGCACCAAACTATGTGCCATTCCTGAAGTTCATCCTTCACCGACTCTTCACTCTGATTCCTCTCTTGGGACTGCGGACCAAGCTATTGCAGATCAGCAGCAAGATGAAAAAGTACACACTACTGCGTCTGTAGAAGCAGAGAGGACTCAGCAGAATAACTGTTCCGAACCCATGGAGGTACAGCAGGATGCCAATTTAATCCCTAACTCAAGTCATACCGAGGTGGAACAGGATGCCAATTTAATACATGACTCAAGTCATACGGAGGTGGAGCAGGAGCAGGATTCCAATGTATCACATAAATCAAAGGAGCAGGATTCCAATGTAAATGTAACACATAAATCAAATAACCTTTTAGGTCGTTATAACAGGTCAAGGAAAAATTTAACTGAGGAAGAAAAAGAAGCAAGGAGGATGCGCAGGATATTGGCAAATAGAGAGTCAGCCAGGCAGACAATTCGACGTAGGCAGGCTCTGTGTGAGGAATTAACAAAAAAAGCTGCCACTTTGGTGGTGGAGAATGAAAGTCTAAAGAAGTGGATGTTTTATCTGAAAATTCATATTTCTTCCACACTTTCTGACAAAAAGGAGAAAGATTTGGCTTTGAAAGAGTATCAGTCTTTGGAGACTACAAATAAGTACTTAAAGGCACAAATCGCCAAGTCAACAAACACTGAAGAAGAGAAAACTCCCGTTGAGCCCGAGTCATCTGTGGCTGAGTTTGGAAATGGACAATCATCACCTTCTTGTAGCCTGAAAGATAAACAAAATAATCTTTCTCTGGGCAAACCTTGTAGTTCTAGTTCATCTTTGAATACACTGGCAAATGTGGATTATCGAGCCTGGACAGAAGCCAGGCTCGTTAATGACCCTTCAAGATTTTCATTGGATGGAGGTGAGAAGAAAACAGGATGTCACATTATAGAAAATTATCATGGACCCTCTCTTGGTTGTAATGGTCAAGCTTGTGCTTCCGAACAAGAAAACGAGCTTCAATTACATTCTAGTCCAAACAATAAAGCATCTTCAACGGCTTATATTGGTGCATCTTCAGTTGAAAAGAAACAAAAACAGTTCATTTGCCAGGGGAAAAGTCTAGCTGATGCAGTTGCTGCGGCAGAAGCAAGAAAGAGGAGAAAGGAACTAACCAAGCAGAAAAGCATCCATAGCCGCCAGTCTCGAATGCAGTGTTGA | 1353 | 0.4294 | MDAESEKRAFTSTSVSRSSSCEGMDRLVDKEEMEAAETLAQLAMRDSHSTDKWCTKLCAIPEVHPSPTLHSDSSLGTADQAIADQQQDEKVHTTASVEAERTQQNNCSEPMEVQQDANLIPNSSHTEVEQDANLIHDSSHTEVEQEQDSNVSHKSKEQDSNVNVTHKSNNLLGRYNRSRKNLTEEEKEARRMRRILANRESARQTIRRRQALCEELTKKAATLVVENESLKKWMFYLKIHISSTLSDKKEKDLALKEYQSLETTNKYLKAQIAKSTNTEEEKTPVEPESSVAEFGNGQSSPSCSLKDKQNNLSLGKPCSSSSSLNTLANVDYRAWTEARLVNDPSRFSLDGGEKKTGCHIIENYHGPSLGCNGQACASEQENELQLHSSPNNKASSTAYIGASSVEKKQKQFICQGKSLADAVAAAEARKRRKELTKQKSIHSRQSRMQC | 450 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vian2g02476 | 450 | MobiDBLite | consensus disorder prediction | 139 | 161 | - | - | |
Vian2g02476 | 450 | MobiDBLite | consensus disorder prediction | 139 | 166 | - | - | |
Vian2g02476 | 450 | MobiDBLite | consensus disorder prediction | 431 | 450 | - | - | |
Vian2g02476 | 450 | MobiDBLite | consensus disorder prediction | 97 | 111 | - | - | |
Vian2g02476 | 450 | Gene3D | - | 189 | 241 | - | - | |
Vian2g02476 | 450 | MobiDBLite | consensus disorder prediction | 64 | 111 | - | - | |
Vian2g02476 | 450 | SUPERFAMILY | Leucine zipper domain | 190 | 236 | IPR046347 | GO:0003700|GO:0006355 | |
Vian2g02476 | 450 | MobiDBLite | consensus disorder prediction | 274 | 306 | - | - | |
Vian2g02476 | 450 | Coils | Coil | 172 | 219 | - | - | |
Vian2g02476 | 450 | MobiDBLite | consensus disorder prediction | 292 | 306 | - | - | |
Vian2g02476 | 450 | Coils | Coil | 425 | 445 | - | - | |
Vian2g02476 | 450 | SMART | brlzneu | 186 | 250 | IPR004827 | GO:0003700|GO:0006355 | |
Vian2g02476 | 450 | CDD | bZIP_plant_GBF1 | 191 | 232 | IPR045314 | GO:0003700|GO:0006355 | |
Vian2g02476 | 450 | MobiDBLite | consensus disorder prediction | 67 | 90 | - | - | |
Vian2g02476 | 450 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
Vian2g02476 | 450 | PANTHER | G-BOX-BINDING FACTOR 3-RELATED | 75 | 232 | IPR044827 | GO:0003700|GO:0006355|GO:0043565 | |
Vian2g02476 | 450 | Pfam | bZIP transcription factor | 186 | 246 | IPR004827 | GO:0003700|GO:0006355 |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vian2g02476 | 176 | 294 | bZIP Transcription Factor Family | AT1G19490 | 53.782 | 2.00e-22 | 97.8 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | bZIP | Vian2g02476 | bZIP_1 | 3.6e-09 | CL0018 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vian2g02476 | - | - | vra:106757437 | 465.307 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Vian2g02476 | 2 | 45448440 | 45452582 | Vian2g02476 | 2 | 45448440 | 45452582 | ECH |