Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02476 ATGGATGCTGAATCGGAGAAGCGCGCATTCACCTCCACTTCCGTTTCTAGGTCCTCTTCCTGTGAAGGTATGGATCGGCTTGTTGACAAGGAGGAGATGGAAGCGGCAGAGACTCTCGCACAGTTGGCAATGCGTGATTCTCACTCTACTGACAAATGGTGCACCAAACTATGTGCCATTCCTGAAGTTCATCCTTCACCGACTCTTCACTCTGATTCCTCTCTTGGGACTGCGGACCAAGCTATTGCAGATCAGCAGCAAGATGAAAAAGTACACACTACTGCGTCTGTAGAAGCAGAGAGGACTCAGCAGAATAACTGTTCCGAACCCATGGAGGTACAGCAGGATGCCAATTTAATCCCTAACTCAAGTCATACCGAGGTGGAACAGGATGCCAATTTAATACATGACTCAAGTCATACGGAGGTGGAGCAGGAGCAGGATTCCAATGTATCACATAAATCAAAGGAGCAGGATTCCAATGTAAATGTAACACATAAATCAAATAACCTTTTAGGTCGTTATAACAGGTCAAGGAAAAATTTAACTGAGGAAGAAAAAGAAGCAAGGAGGATGCGCAGGATATTGGCAAATAGAGAGTCAGCCAGGCAGACAATTCGACGTAGGCAGGCTCTGTGTGAGGAATTAACAAAAAAAGCTGCCACTTTGGTGGTGGAGAATGAAAGTCTAAAGAAGTGGATGTTTTATCTGAAAATTCATATTTCTTCCACACTTTCTGACAAAAAGGAGAAAGATTTGGCTTTGAAAGAGTATCAGTCTTTGGAGACTACAAATAAGTACTTAAAGGCACAAATCGCCAAGTCAACAAACACTGAAGAAGAGAAAACTCCCGTTGAGCCCGAGTCATCTGTGGCTGAGTTTGGAAATGGACAATCATCACCTTCTTGTAGCCTGAAAGATAAACAAAATAATCTTTCTCTGGGCAAACCTTGTAGTTCTAGTTCATCTTTGAATACACTGGCAAATGTGGATTATCGAGCCTGGACAGAAGCCAGGCTCGTTAATGACCCTTCAAGATTTTCATTGGATGGAGGTGAGAAGAAAACAGGATGTCACATTATAGAAAATTATCATGGACCCTCTCTTGGTTGTAATGGTCAAGCTTGTGCTTCCGAACAAGAAAACGAGCTTCAATTACATTCTAGTCCAAACAATAAAGCATCTTCAACGGCTTATATTGGTGCATCTTCAGTTGAAAAGAAACAAAAACAGTTCATTTGCCAGGGGAAAAGTCTAGCTGATGCAGTTGCTGCGGCAGAAGCAAGAAAGAGGAGAAAGGAACTAACCAAGCAGAAAAGCATCCATAGCCGCCAGTCTCGAATGCAGTGTTGA 1353 0.4294 MDAESEKRAFTSTSVSRSSSCEGMDRLVDKEEMEAAETLAQLAMRDSHSTDKWCTKLCAIPEVHPSPTLHSDSSLGTADQAIADQQQDEKVHTTASVEAERTQQNNCSEPMEVQQDANLIPNSSHTEVEQDANLIHDSSHTEVEQEQDSNVSHKSKEQDSNVNVTHKSNNLLGRYNRSRKNLTEEEKEARRMRRILANRESARQTIRRRQALCEELTKKAATLVVENESLKKWMFYLKIHISSTLSDKKEKDLALKEYQSLETTNKYLKAQIAKSTNTEEEKTPVEPESSVAEFGNGQSSPSCSLKDKQNNLSLGKPCSSSSSLNTLANVDYRAWTEARLVNDPSRFSLDGGEKKTGCHIIENYHGPSLGCNGQACASEQENELQLHSSPNNKASSTAYIGASSVEKKQKQFICQGKSLADAVAAAEARKRRKELTKQKSIHSRQSRMQC 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02476 450 MobiDBLite consensus disorder prediction 139 161 - -
Vian2g02476 450 MobiDBLite consensus disorder prediction 139 166 - -
Vian2g02476 450 MobiDBLite consensus disorder prediction 431 450 - -
Vian2g02476 450 MobiDBLite consensus disorder prediction 97 111 - -
Vian2g02476 450 Gene3D - 189 241 - -
Vian2g02476 450 MobiDBLite consensus disorder prediction 64 111 - -
Vian2g02476 450 SUPERFAMILY Leucine zipper domain 190 236 IPR046347 GO:0003700|GO:0006355
Vian2g02476 450 MobiDBLite consensus disorder prediction 274 306 - -
Vian2g02476 450 Coils Coil 172 219 - -
Vian2g02476 450 MobiDBLite consensus disorder prediction 292 306 - -
Vian2g02476 450 Coils Coil 425 445 - -
Vian2g02476 450 SMART brlzneu 186 250 IPR004827 GO:0003700|GO:0006355
Vian2g02476 450 CDD bZIP_plant_GBF1 191 232 IPR045314 GO:0003700|GO:0006355
Vian2g02476 450 MobiDBLite consensus disorder prediction 67 90 - -
Vian2g02476 450 MobiDBLite consensus disorder prediction 1 25 - -
Vian2g02476 450 PANTHER G-BOX-BINDING FACTOR 3-RELATED 75 232 IPR044827 GO:0003700|GO:0006355|GO:0043565
Vian2g02476 450 Pfam bZIP transcription factor 186 246 IPR004827 GO:0003700|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02476 176 294 bZIP Transcription Factor Family AT1G19490 53.782 2.00e-22 97.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vian2g02476 bZIP_1 3.6e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02476 - - vra:106757437 465.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02476 2 45448440 45452582 Vian2g02476 2 45448440 45452582 ECH