Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02464 ATGGTTCAGAAGTACTTGTTGCACGAGCTACTTCAGGAGGATCAAGAACCCTTTCTTCTAAACAAGTACATTTCCGATAGGCGAAGCCAGATGAAACGGCCTTCCTCCAATACCTCTTTGCAAGTCAAGAAACACAAATCAACCAATCCAACCCCAAGCTTCCCGGGGAATTTCTGCAAAAGTGCTTGTCTTTTTTCCCTCACAGACACCCCTGATTTCAGAAAATCTCCACTCTTCGAATTCGCTTCCGCAGCAAAAAGCCCTTGCAAATCCCCCAACGCTATTTTCCTTCACATCCCTTCCCGAACCGCGTCTCTGCTTCTGGAAGCCGCTGTCAGGATCCAGAAACACTCCTCACCCGCTTCACGGCCCAAAATGAAAGCCCAATCCTTCGGTCTCTTCGGTTCCCTCTACAAGAGACTCACGCAACGGGGCCAGAAGAAGCGCGAGATAGAGGGTGCTGGAAGCGTCAAGGTTTCGGTTAAGGACATTCTGAAGTGGGATTCCTCTGTTGGGCGAAAAAAAGGTTCCAACAAGAAAGAGGATGAAGAAACTGTGAATGTGAATGCAAATGCGTGTGAAGTGGGGTTTGTGTGTTCTTACAATGGTAGAACTAGTAGTGCTGTTTGGTCAGAGACCAACGCGGATAAATCCATCAACATGGAAACGTCTAGTAGCGGCTACTCCGACGAGATTCACTTCATAACCAATTACACAAACTCCACCCGCTTCTCCGAAAGTCCGTTCCGTTTTGTTCTTCAAACTAGTTCTCCCTCCGACGGCCGCCACACGCCGGAGCTTACCTCGCCAAGTCGCCACGCAACTGAGGAGAAAGAAAGTAATGGAGGCGAGAGTGTGAAGAAGTTCGAATCAGGGGAAGAAGAGGAGGAAGACAAAGAACAGTGCAGTCCAGTGTGTGTGTTAGACCCACCGTTCGAGGACGATGACGAAGGGCATGGGAACGGTGATGAAGGAGAGGAGGGTGGTTTTGATTTGGAGTGCAGCTATGCGATTGTACAGAGAGCCAAGCAGCAGTTATTGTACAAGCTTCGTAGATTTGAGAAACTGGCAGAGTTGGATCCGGTAGAACTTGAGAGAAGAATGCATGATGAAGAAGACGAGGAGGAGGATGAATCATTTATGAAGGAAACATTACGTAAAGAAAATGACAGTAGAGAGGTGATTTTGAAAGGTCTGTGGCAGTCAAGGGTGTATGACAGACAGCAAATCCCAGATGAGTTTAAGAAGCTGGTATCTGATCTGATTATGGAAGAAGTGAGAGCACTTGATGAGTTGGAAGATAGGGATATGGTGATAACAAGGATATGCAAGAGGTTGGAGTTGTGGAAAGAAGTGGAGTCGAACACAATTGATATGATGATAGAAGATGACTTCTCTAGGGAGGATGGTGGGTGGAAGAAAAATGTGGAGCAGATAAGAAATATGGCTGGGGAGCTTGAGTGTGCTATCTTCGGCTTTCTGCTGGAGGAATTTTCAGAGGAACTAGTATGCTAA 1515 0.47 MVQKYLLHELLQEDQEPFLLNKYISDRRSQMKRPSSNTSLQVKKHKSTNPTPSFPGNFCKSACLFSLTDTPDFRKSPLFEFASAAKSPCKSPNAIFLHIPSRTASLLLEAAVRIQKHSSPASRPKMKAQSFGLFGSLYKRLTQRGQKKREIEGAGSVKVSVKDILKWDSSVGRKKGSNKKEDEETVNVNANACEVGFVCSYNGRTSSAVWSETNADKSINMETSSSGYSDEIHFITNYTNSTRFSESPFRFVLQTSSPSDGRHTPELTSPSRHATEEKESNGGESVKKFESGEEEEEDKEQCSPVCVLDPPFEDDDEGHGNGDEGEEGGFDLECSYAIVQRAKQQLLYKLRRFEKLAELDPVELERRMHDEEDEEEDESFMKETLRKENDSREVILKGLWQSRVYDRQQIPDEFKKLVSDLIMEEVRALDELEDRDMVITRICKRLELWKEVESNTIDMMIEDDFSREDGGWKKNVEQIRNMAGELECAIFGFLLEEFSEELVC 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02464 504 PANTHER OS04G0572500 PROTEIN 1 502 - -
Vian2g02464 504 MobiDBLite consensus disorder prediction 30 51 - -
Vian2g02464 504 MobiDBLite consensus disorder prediction 29 51 - -
Vian2g02464 504 MobiDBLite consensus disorder prediction 266 294 - -
Vian2g02464 504 MobiDBLite consensus disorder prediction 253 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02464 Vian-Chr2 45202223 45204768 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02464 1 313 TRM (TON1 Recruiting Motif) Superfamily AT5G03670 44.940 3.87e-61 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02464 - - gmx:100790018 669.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02464 2 45202223 45204768 Vian2g02464 2 45202223 45204768 ECH
Vian2g02464 2 45202223 45204768 Vian3g02113 3 29767032 29770426 PCT