Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02463 ATGGATATGGAGGAAGAAGCCAATGATCACCACACAATAGACATATGGAAGGTAATAGACAGAGAGAGGTTGGCGTCGATGGAGCTGAAGATTTCGGAGAATCCCAAGTTGCTAAGTAAATCAGCGGGAAAGAGATCGTGCTGCATCTTCAGGGTCCCGCAGAGCCTAATCGAGGCCAACGGAAAAGCCTACCAACCTCGAATCGTGTCCATAGGACCATACCACCGTGCCCAACCTCGTCTCAACATGATCGAGGAACACAAGTGGCGTTACCTCGGTTCCCTTCTCAACAGAACCAAAACCAAAGGTTTTGGCTTAGATGATTTATTCAAAGCCCTTGCCCCTTTAGAATCCAAAGCCAGAGAGTGCTATTCAGAAACCATCCCCCTTGACTCTCACGACTTCATCCAGATGATGATCCTCGACGGCTGTTTCATCGTTGAGCTCTTTCGCAAAGTCGTTGGATTAGTACCCTTTGAACGCGACGACCCTCTTGTTACCATGGCCTGGATATTACCCTTCTTTTACCGAGATTTTCTCAAGCTTGAAAACCAGATCCCGTTCTTCGTTCTGAACCAGTTATTCCAAGTTACAAAACTACCGGGAGAAAAGTCAACGTGGAATCTGTCAACTCTGGCTATGATGTTCTTCAACAACTCGTTACAAAGACCAGACGATGTTTCTGGCTGGGCAAACGTGAATGGAAAACACTTACTCGACCTGGTTCGTTCCAGTTTCATTCCGAACCACGCAGAAACTAGAGAGCCAAGAAAAAGATTCACCACGCCGACCCACGTGATCCACTGCGTCTCTAAGCTTCAATTAGAGATTGATGGTAAATGGGGTAAACAACCAAAGTATTCTCACGAAGGCAGTTTTGAGAAGCCTGTGATCGAGGAAAATGGAAATGAAGAAAATGAGCATCGGTTTAACTATACGGACACTTCTCCACCAGAATCGTTCGGTCAATTGAGAAGTGCGATAAAAGAAAGGCATGAGTTTAACTCGATCTTTGGGAATTCTATATCTGACGATTTTGAAAAAGGTTCTCCCATGGCTAGTGATGGAGGTTCTGATTCAGATACTGATTCTGGTTCAACATCTGATTCTAAAAGGGAAGGTTGCATCCTAACCCCAATGAAGGAAAATGTTCTTCCACCTGTGACTGTAAATTTCCAACAAGGTCTTGGTCAGAGGTTTAAACAACCAGCTAGAACTGGTATTGATTTTTCGATATTTGAAGAGTCTGAGTTATTGAATGCGGGGGACGACGATATCTATCTTATTGCAATTAAAGCAGATGCATCCACTAGTGACCTTGATGAATCAAAATCAAATGAAACTCCATCATATGGTAACACAAACTCTCAGATAACTCAAGTTGTGTTTGAGAAGGATAAAGGAGAGTTTCAGGCAATGACAGTGAAGGTCGATGTGGTGATGGCTGTTGGAGGTGGTGGACGCTGCTCCGTTGAAGAGTAA 1482 0.442 MDMEEEANDHHTIDIWKVIDRERLASMELKISENPKLLSKSAGKRSCCIFRVPQSLIEANGKAYQPRIVSIGPYHRAQPRLNMIEEHKWRYLGSLLNRTKTKGFGLDDLFKALAPLESKARECYSETIPLDSHDFIQMMILDGCFIVELFRKVVGLVPFERDDPLVTMAWILPFFYRDFLKLENQIPFFVLNQLFQVTKLPGEKSTWNLSTLAMMFFNNSLQRPDDVSGWANVNGKHLLDLVRSSFIPNHAETREPRKRFTTPTHVIHCVSKLQLEIDGKWGKQPKYSHEGSFEKPVIEENGNEENEHRFNYTDTSPPESFGQLRSAIKERHEFNSIFGNSISDDFEKGSPMASDGGSDSDTDSGSTSDSKREGCILTPMKENVLPPVTVNFQQGLGQRFKQPARTGIDFSIFEESELLNAGDDDIYLIAIKADASTSDLDESKSNETPSYGNTNSQITQVVFEKDKGEFQAMTVKVDVVMAVGGGGRCSVEE 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02463 493 Pfam Plant protein of unknown function 49 274 IPR004158 -
Vian2g02463 493 PANTHER BNAC04G53230D PROTEIN 29 273 - -
Vian2g02463 493 MobiDBLite consensus disorder prediction 340 373 - -
Vian2g02463 493 MobiDBLite consensus disorder prediction 284 320 - -
Vian2g02463 493 MobiDBLite consensus disorder prediction 284 312 - -
Vian2g02463 493 MobiDBLite consensus disorder prediction 355 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02463 Vian-Chr2 45194987 45198111 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02463 373 476 C3H Transcription Factor Family AT3G09770 49.524 9.53e-25 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02463 - - gmx:100789486 447.973