Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02451 ATGGAAATGCCTGCCAGAAGATCCAGCAGCTACTCCCTCCTCAACCAAGCGCCAGATGACAACTTAACTGCTCCGTTGTTCGACTCTTCAGTGTTCGACTCTTCCTCCGGCGACGGTAAAAACAACAGGAGCAAGTTGGAGAGAGTATCCGATTGGGACTCTGTCGTGGATCACAGGCAGGGGAACAGGATCGGGAATTTGTACTCCTCTTTCGGGTTCGGGATGCAGCGGCAGTCAAGTGGGAGCAGTTTCGGTGAGAGCTCACTCTCCGGCGAGTTTTGCGCTCCCACTATGTTCACTGTGACACCTGATGAGACAGACAAAATCACACTTGGAGAGGTTAGAGGCAGGATTCCGGACGCTGGGCCAGCTAGGAGCGGCGGATCCTATGGCAAGAGCTGGGCGCAGCAGACTGAGGAGAGTTATCAGTTACAGCTGGCATTGGCTATTCGACTTTACTCAGAGGCCACGTGCGCTGATGATCCCAATTTTCTGGATCCCGTGCCCCATGAATCCTCTTCAAGGTCATCGTGTTCTGCAGAGACAGTTTCCCATAGATTTTGGGTAAATGGCTGCCTACTGTACTTCGACAAAATTCCTGATGGCTTTTATTTAATTCATGGAATGGATCCCTATTTATGGACCGTGTGCACTGATCTACAGGAAAATGGCCGAATTCCTTCAATAGAGTCACTAAAGTCTATAGATCCTTCGACCGTTTCTTCACTTGAAGTAATTTTGGTGGATAGACAGCGTGATCCTATCTTAAAAGAATTGCAGAACAAGGTACATGACATTTTTTGTCGCAGCACAGTAACAACAGATGTTGTAGACCAGCTTGCAAAGCTTGTATTCGATTGTATGGGGGGTTCAGCTTATGTATGGGAAGGCGATCTTTTTCCCATATGGAGGGAGTGCATTAATGATCTAAGAGATCGCATAGGATCTGTTGTTGTTCCAATTGGCAGCTTATCTACTGGACTTTGCAGACATCGTGCTGTATTATTCAAAGTGCTAGCTGACACCATTGGTTTACCGTGTCGAATTGCAAAGGGTTGTAAATATTGTTCAAGAGAAGATGCCTCTTCATGTCTTGTTCGGTTTGGGCTTGACAGGGAATATATGGTTGATCTAATTGGAAAGCCTGGCTACTTATGTGAGCCCGATTCCTTGCTGAATGGTCCATCCTCCATCTCATTTTCTTCACCCTTGCGCTTTCCAAGACTCAAACCAGATGAACCTACCATTGATTTCAGGTCACTGGCCAAACAATATTTCTCGGATAGTCTGCCTAGTGAGCTTGTCTTCGATAGTGGTGTTGCAGAACAGTATGAAAGGCAGTACAGGGACAGGGACCCTGGACCAATTTCAAATGATAACAACAGAAGTTCTCTTGTTCCTCCACAACCACAAGCTTATCGTCCAAGTGCACATGATCAAGGCTCCGAAACATTTAAATCAGCTAACCCTCCACAGAATGTTGTTGGGCCGTCATTGACAAGCAAGGATTCATTGCTTTTAAAGCATAATCTTCCTGCTCATAGAGATACAGAGACCCGATTAATGATTTCTAGCAAACCATCTAGAGAGTTTTCTGTAGATATGGAGGATCTGGACATCCCATGGACTGATCTTGTTTTGAAAGGGAGAATAGGGTCAGGTTCTTTTGGAACTGTACATCAAGCTGAGTGGAATGGCTCGGAGGTTGCTGTGAAAATTTTGATGGAACAAGACTTTGCAGGTGAACGCTTCCAGGAATTCTTGAGGGAGGTTGCAATAATGAAAAGCTTACGGCATCCAAACATTGTTTTACTTATGGGTGCAGTCACTAAGCCTCCCAATTTATCAATTGTCACAGAATACTTGTCCAGGGGTAGCTTGTACAGGCTGTTGCATAAACCTGGTGCCACAGAAATGTTGGATGAGAGACGTAGGATAAGTATGGCTTATGATGTGGCTAAGGGGATGAATTATCTTCATAAACGTAATCCTCCCATTGTTCACAGAGATCTGAAATCTCCAAACCTTCTTGTTGACAAGAAATATACAGTGAAGGTTAGTGATTTTGGGCTTTCCCGACTAAAGGCAAACACATTTCTCTCATCCAAGTCAGCTGCTGGGACACCTGAGTGGATGGCTCCAGAAGTTCTTCGTGATGAGCCATCCAATGAGAAGTCAGATGTTTACAGCTTTGGTGTCATCTTGTGGGAGCTTGCAACATTGCAACAGCCTTGGAGTAATTTGAATCCACCACAGGTTGTGGCAGCTGTTGGCTTTAAGGGAAAAAGACTTGAAATACCACGAGATTTAAATCCTCAAATAGCATCAATAATTGAGGCTTGCTGGGCCAACGAACCCTGGAAACGCCCTTCTTTTTCAAGTATTATGGATTCTTTGAAAGGATTGATCAAACCCCCTGTACCTCAACCTGGTCGTCCAAACATGTCGTTGCTCATTTGA 2460 0.4512 MEMPARRSSSYSLLNQAPDDNLTAPLFDSSVFDSSSGDGKNNRSKLERVSDWDSVVDHRQGNRIGNLYSSFGFGMQRQSSGSSFGESSLSGEFCAPTMFTVTPDETDKITLGEVRGRIPDAGPARSGGSYGKSWAQQTEESYQLQLALAIRLYSEATCADDPNFLDPVPHESSSRSSCSAETVSHRFWVNGCLLYFDKIPDGFYLIHGMDPYLWTVCTDLQENGRIPSIESLKSIDPSTVSSLEVILVDRQRDPILKELQNKVHDIFCRSTVTTDVVDQLAKLVFDCMGGSAYVWEGDLFPIWRECINDLRDRIGSVVVPIGSLSTGLCRHRAVLFKVLADTIGLPCRIAKGCKYCSREDASSCLVRFGLDREYMVDLIGKPGYLCEPDSLLNGPSSISFSSPLRFPRLKPDEPTIDFRSLAKQYFSDSLPSELVFDSGVAEQYERQYRDRDPGPISNDNNRSSLVPPQPQAYRPSAHDQGSETFKSANPPQNVVGPSLTSKDSLLLKHNLPAHRDTETRLMISSKPSREFSVDMEDLDIPWTDLVLKGRIGSGSFGTVHQAEWNGSEVAVKILMEQDFAGERFQEFLREVAIMKSLRHPNIVLLMGAVTKPPNLSIVTEYLSRGSLYRLLHKPGATEMLDERRRISMAYDVAKGMNYLHKRNPPIVHRDLKSPNLLVDKKYTVKVSDFGLSRLKANTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWSNLNPPQVVAAVGFKGKRLEIPRDLNPQIASIIEACWANEPWKRPSFSSIMDSLKGLIKPPVPQPGRPNMSLLI 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02451 819 ProSitePatterns Protein kinases ATP-binding region signature. 551 572 IPR017441 GO:0005524
Vian2g02451 819 CDD STKc_MAP3K-like 551 799 - -
Vian2g02451 819 SUPERFAMILY Protein kinase-like (PK-like) 522 798 IPR011009 -
Vian2g02451 819 PRINTS Tyrosine kinase catalytic domain signature 770 792 IPR001245 GO:0004672|GO:0006468
Vian2g02451 819 PRINTS Tyrosine kinase catalytic domain signature 660 678 IPR001245 GO:0004672|GO:0006468
Vian2g02451 819 PRINTS Tyrosine kinase catalytic domain signature 619 632 IPR001245 GO:0004672|GO:0006468
Vian2g02451 819 PRINTS Tyrosine kinase catalytic domain signature 707 717 IPR001245 GO:0004672|GO:0006468
Vian2g02451 819 PRINTS Tyrosine kinase catalytic domain signature 726 748 IPR001245 GO:0004672|GO:0006468
Vian2g02451 819 Pfam Protein tyrosine and serine/threonine kinase 546 799 IPR001245 GO:0004672|GO:0006468
Vian2g02451 819 ProSitePatterns Serine/Threonine protein kinases active-site signature. 666 678 IPR008271 GO:0004672|GO:0006468
Vian2g02451 819 Gene3D Transferase(Phosphotransferase) domain 1 624 808 - -
Vian2g02451 819 MobiDBLite consensus disorder prediction 457 499 - -
Vian2g02451 819 FunFam Serine/threonine-protein kinase isoform 1 535 623 - -
Vian2g02451 819 SMART serkin_6 545 807 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian2g02451 819 MobiDBLite consensus disorder prediction 447 499 - -
Vian2g02451 819 FunFam Serine/threonine-protein kinase CTR1 624 809 - -
Vian2g02451 819 Gene3D Phosphorylase Kinase; domain 1 538 623 - -
Vian2g02451 819 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 175 802 - -
Vian2g02451 819 Pfam Ethylene-responsive protein kinase Le-CTR1 180 386 - -
Vian2g02451 819 ProSiteProfiles Protein kinase domain profile. 545 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02451 Vian-Chr2 45043052 45059323 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02451 1 815 MAP Kinase Kinase Kinase AT5G03730 63.412 0.0 931
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Vian2g02451 PK_Tyr_Ser-Thr 3.7e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02451 K14510 - gmx:100810555 1350.88