Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02449 ATGAAGAGGGGTAGCGGCCATCAAGCAAATAATGGTGGAGCAATTAGGGTTCGCAATGAGCGCGCCTCTTCCCGTTCCAGCTTTGATGTGCTGCATCACTTTGGGGTTCACTTCGGGAATAACCAGCGACACCTTCTCGTCCATCCGAAAGACGGAGCTATTGTCCACCACCACTGTCCCCCGATCCATCGCGGCGGGGCCGAATTTCTTGTTGATGGACCTGCCGGCGCTGAAGAGCGCGATGTCAACACCGTTGAAACTATCCGCCGTGAGCTCCTCCACGACGTAGTCCCTATCCTCAAAGGTGATCCGGTAGTCGGCGGGGCGCTACGAGGCCAGCATTTTGATGGAGCGGTAGGGGAAGTCGCGGTCAGAGAGCACGGAGAGGAACTCCTGGCCGACGACGCCAGTGACGCCGACGACGGCAATGCAGGTCAAACTATTTGCAACGGCAAAAGTGTTGAGGTGAAAAGTGGAGAATCTCTCAAGGTTGACCCAGGAGACGACAAGATTATCCACCTTTCAAATGCATGCCTGGGGGATGTGACTAAGGCTAAAGGAGAATCGGTGGCCCTGTATGTGAAGTTTGGTAACCAGAAGCTTGTGCTTGGAACGCTTTCTTCTGATAAATTTCCTCAAATATCTTATGATTTGATATTTGAGAAGGAATTTGAGCTATCCCATAGCTGGAAAAATGGGAGGAAACCTGACTTTGAGGTGAAGCATGGTGTCAAACCTGATGAAGCTAAACAGAAAAAGACAGCAGATCCAAAGAAAAATGAGAAGGCTAAGGAAAAGGATGCAGATGGTGAAGATGAAGATTCATCCGAATCTGATTCTGACGATGATTCAAGTGAAGATAAGATTGAAGCAGGCAAGAAGCGGAATATTGACTCTGCCAAGAAAACAACTATCCCTGTGAAGAAGGCAAAATTTGTTACTCCTCAGAAGACTGGTTAG 960 0.4906 MKRGSGHQANNGGAIRVRNERASSRSSFDVLHHFGVHFGNNQRHLLVHPKDGAIVHHHCPPIHRGGAEFLVDGPAGAEERDVNTVETIRRELLHDVVPILKGDPVVGGALRGQHFDGAVGEVAVREHGEELLADDASDADDGNAGQTICNGKSVEVKSGESLKVDPGDDKIIHLSNACLGDVTKAKGESVALYVKFGNQKLVLGTLSSDKFPQISYDLIFEKEFELSHSWKNGRKPDFEVKHGVKPDEAKQKKTADPKKNEKAKEKDADGEDEDSSESDSDDDSSEDKIEAGKKRNIDSAKKTTIPVKKAKFVTPQKTG 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02449 319 FunFam Histone deacetylase HDT1 150 235 - -
Vian2g02449 319 MobiDBLite consensus disorder prediction 270 285 - -
Vian2g02449 319 MobiDBLite consensus disorder prediction 232 269 - -
Vian2g02449 319 Pfam Nucleoplasmin-like domain 153 230 IPR041232 -
Vian2g02449 319 MobiDBLite consensus disorder prediction 286 305 - -
Vian2g02449 319 Gene3D Nucleoplasmin core domain 150 236 - -
Vian2g02449 319 MobiDBLite consensus disorder prediction 232 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02449 Vian-Chr2 44999626 45007650 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02449 154 233 C2H2 Transcription Factor Family AT3G44750 55.000 1.62e-23 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02449 - - vun:114187058 221.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02449 2 44999626 45007650 Vian2g02449 2 44999626 45007650 ECH