Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02439 ATGGCGTTGACTTCAGAATATTTTTCACTCTTTCTCCTCCTACTCCTGTCTGTTCTGTTTATCTTCCTCCTCCGTCGCAAAACCGCAGCCAGAAACCGCCGTCTTCCTCCGGGACCACCGGGATGGCCCATATTCGGAAACATGTTTCAGCTCGGAGACAGGCCTCACCGCACCCTCACCGATCTAAGGGCCAAACACGGCCCCGTCGTGTGGCTCCAAATCGGAGCCATGAACACCATGGCTATTCTCTCAGCCGACGCCGCCACCGTGTTCTTCAAGCATCACGACCACGCCTTCGCAGACCGCAACATAACCGAAACCATGCGCGTCCACAACTACAACAAATCCTCCCTGGCCTTAGCCCCTTACGGCCCTTACTGGCGCCTCATGCGGCGCCTCGTCACCGTGGACATGTTGGTGGCGAAACGTATAAACGAAACCGCTCCAGTGCGGCGGAAGTGCGTAAACAACATGATAACATGGTTGAGCAAAGAGGCTGAGAAGTTGGAAGAGGGTGGCGGAGTCCACGTGGCGCGGTTCGTGTTCCTGATGTCGTTCAACCTCTTAGGGAACCTGATGCTGTCGCGGGACCTGTTCGACCCTGATTCGGAAGACGGGTCGGAGTTTTTCACTGCGATGATGGGTTTGATGGAGTGGTCAGGGCACGCTAACGTCGCCGACATGTTCCCGTGGTTGAGGCGGCTGGACCCGCAAGGTTTGAGGAGGAAGATGGATCGAGACATGGGAAAAGCTCTGGAAATCGCGTCGAAGTTCGTGAAAAAGCGTTTGGACGAGAAGAACTCCGATGAAAAAACGAGGGACTTCTTGGATGTGTTGATTGACTTTCAAAGCAGCAACAGTGAAGAAACACTCAAAATTTCAGACAAAGACCTCAACATTTTCATTTTGGAAATATTCTTGGCTGGGTCAGAAACAACAAGCAGCACAATTGAATGGACGATGATGGAGCTTCTGCGCAACCCGGAGTGGCTGGAGAAGGTGAAAAGTGAGCTCGATCGGGTGGTTGGGCGTGGAAGAAAAGTTGAAGAGAGTGACATAGACAACCTTCCTTACCTACAAGCCGTGATTAAGGAAACACTTCGATTGCATCCTCCCATTCCGTTGCTTGTTCCTCGGAAGGCTACGAAGAACACAAAAATTCTTCATCTTGTGTTGGGATCGTTGCTTCACGAATTTGACTGGAAACTTCCGAGTCATGTCACACCCTCCACCTTGGATACCAGGGAAAGGCTCGGTATCACCATGCGAAAGCTTCAACCTTTGCTTGCTGTGCCTAAATTAATTCCCTCTTCCTCTTCCATCATTAATGATTAA 1335 0.5124 MALTSEYFSLFLLLLLSVLFIFLLRRKTAARNRRLPPGPPGWPIFGNMFQLGDRPHRTLTDLRAKHGPVVWLQIGAMNTMAILSADAATVFFKHHDHAFADRNITETMRVHNYNKSSLALAPYGPYWRLMRRLVTVDMLVAKRINETAPVRRKCVNNMITWLSKEAEKLEEGGGVHVARFVFLMSFNLLGNLMLSRDLFDPDSEDGSEFFTAMMGLMEWSGHANVADMFPWLRRLDPQGLRRKMDRDMGKALEIASKFVKKRLDEKNSDEKTRDFLDVLIDFQSSNSEETLKISDKDLNIFILEIFLAGSETTSSTIEWTMMELLRNPEWLEKVKSELDRVVGRGRKVEESDIDNLPYLQAVIKETLRLHPPIPLLVPRKATKNTKILHLVLGSLLHEFDWKLPSHVTPSTLDTRERLGITMRKLQPLLAVPKLIPSSSSIIND 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02439 444 Gene3D Cytochrome P450 21 390 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g02439 444 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 385 433 - -
Vian2g02439 444 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g02439 444 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g02439 444 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g02439 444 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g02439 444 SUPERFAMILY Cytochrome P450 31 432 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g02439 444 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g02439 444 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g02439 444 Pfam Cytochrome P450 36 388 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02439 Vian-Chr2 44892309 44893944 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02439 326 432 Cytochrome P450 AT3G52970 28.182 3.30e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02439 K22983 - gmx:100785241 603.208