Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02392 ATGGTGGTGGCAGAGTTGAGAGGAATGAAGAGTCTCGGCTACAACGTTATCACCGGGCGTTGGTTCATGCTGTTTGCATCTTTACTTATCATGTCCGTTGCTGGGGCAACCTATATGTTTGGAGCATACTCTAATGAGGTCAAAACCTCTTTGGGGTACGACCAGTCCACTCTCAACTTGCTCAGCTTCTTCAAAGACCTAGGTGCCAACGTTGGAGTCGTATCCGGGTTGGTCAACGAGATAACACCACCCTGGGTGGTACTCTCTATAGGGGTTCTTATGAACTTCTTTGGCTACTTCATGATATGGCTTGCAGTCTCTGGCCGCATTGCCAAACCCCAACTTTGGAAAATGTGTCTCTACATTTGCATTGGTGCAAATTCTCAAACCTTTGCCAACACTGGTGCTTTGGTCACATGTGTCAAGAACTTCCCAGGAAGCCGTGGCAGTCTTTTAGGCCTACTCAAAGGTTACGTTGGTCTAAGTGGTGCCATCATCACACAGCTCTACCATGCCTTCTATGGTGATCACAACCCTCAGGCCCTTATCTTACTCATTGCGTGGCTCCCTGCCGCTGTTTCCTTCCTTTTCCTTCCAACAATTCGGATATTCAACACAGTCCACCAGCCTAAGAACAACAGAGTTTTCTACCACCTTCTTTATATTTCACTTTGTCTTGCAGGGTTTCTCATGGTTTTGATCCTTGTACAAAACAAGCTTAGTTTCTCAAGGATTGAGTACACAGTCGATGGCCTTGTTGTTCTCTCCTTTCTTCTTCTCCCACTCGCCGTGGTATTTAGAGAGGAGGTAAATCATTTAAAGGCCAAAACGGAAGGTTTGACCGATTCAGCACCTGAGTTGAAAGTAGTCACTGAAGTTATTCCACCTCCAAACGTCGAGCAAGAAGTACTACCAACCACCACAAGTTCACACGAGAAAATTTCATGTTTCAGGAACATACTCAACCCCCCTAAGAGGGGAGAAGACTACACAATTTTGCAAGCACTTTTCAGTGTGGACATGCTGACTTTGTTCGTTGCAACAACGTTCGGTGCTGGCGGAACACTAACAGCCATAGACAATCTAGGACAGATTGGAAACTCATTGGGTTACCCAAGTAAAAGCACGACAACCTTTGTGTCCTTGGTGAGCATATGGAACTACTTAGGAAGAGTAGCTGCAGGTTATGCCTCTGAAGTCCTCTTAGTCAAATACAAAGTTCCTCGTCCCTATATGGTCACTCTAGTTTTGCTTCTCTCTTGTGTTGGACATATTCTGATAGCCCTTGGCGTCCCAAACTCTCTCTACTTGTCTTCGGTGATTATTGGGTTTTGTTTTGGAGCTCAGTGGCCACTGATGTTTGCAATCATATCAGAAATATTTGGCCTTAAATACTACTCCACGTTATACAACTTAGGAGGCGCGGCAAGCCCTGTTGGATCGTACATTCTAAACGTGAAAGTGGCTGGTGTTTTGTATGATAAAGAGGCTTTGAAACAATTGAAGGCCAAAGGACTAACGAGAGAAGAAGGGAAGGACCTAACTTGTGTAGGAGTGCAATGCTACAGAATGGCTTTTATCATAATCACAGCTTCAACGTTGGTTGCGTGTTTAGCCTCGTTCATCTTGGCGCTGAGGACTAGAAAATTTTACAAAGGGGATATCTATAGAAAGTTTAGAAGGGAACATGAAACAACAGAGAATGAGACGGAGATTACAAAGGAAGGTGTTAGATGTTCTGGTTGA 1746 0.4467 MVVAELRGMKSLGYNVITGRWFMLFASLLIMSVAGATYMFGAYSNEVKTSLGYDQSTLNLLSFFKDLGANVGVVSGLVNEITPPWVVLSIGVLMNFFGYFMIWLAVSGRIAKPQLWKMCLYICIGANSQTFANTGALVTCVKNFPGSRGSLLGLLKGYVGLSGAIITQLYHAFYGDHNPQALILLIAWLPAAVSFLFLPTIRIFNTVHQPKNNRVFYHLLYISLCLAGFLMVLILVQNKLSFSRIEYTVDGLVVLSFLLLPLAVVFREEVNHLKAKTEGLTDSAPELKVVTEVIPPPNVEQEVLPTTTSSHEKISCFRNILNPPKRGEDYTILQALFSVDMLTLFVATTFGAGGTLTAIDNLGQIGNSLGYPSKSTTTFVSLVSIWNYLGRVAAGYASEVLLVKYKVPRPYMVTLVLLLSCVGHILIALGVPNSLYLSSVIIGFCFGAQWPLMFAIISEIFGLKYYSTLYNLGGAASPVGSYILNVKVAGVLYDKEALKQLKAKGLTREEGKDLTCVGVQCYRMAFIIITASTLVACLASFILALRTRKFYKGDIYRKFRREHETTENETEITKEGVRCSG 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02392 581 Gene3D MFS general substrate transporter like domains 332 551 IPR036259 -
Vian2g02392 581 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 21 557 - -
Vian2g02392 581 SUPERFAMILY MFS general substrate transporter 20 554 IPR036259 -
Vian2g02392 581 CDD MFS_Mch1p_like 19 537 - -
Vian2g02392 581 Pfam Nodulin-like 20 266 IPR010658 -
Vian2g02392 581 Pfam Major Facilitator Superfamily 362 547 IPR011701 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02392 Vian-Chr2 44382609 44384354 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02392 1 562 Nodulin-like Gene Family AT2G39210 64.510 0.0 731
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02392 - - gmx:100797779 962.985
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02392 2 44382609 44384354 Vian3g00235 3 2068084 2069895 ECH
Vian2g02392 2 44382609 44384354 Vian2g02392 2 44382609 44384354 ECH
Vian2g02392 2 44382609 44384354 Vian3g02057 3 26372189 26373886 PCT