Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02375 ATGGAGGTTGGAAAGAAGAAGATGCTCAAGTCTTTGATCTCAAAGGTGATGAAGGGTGTTCCGTTCTTGGCACCCAATGGAGCACGTACGAGAAGGGTTTGTTATGTCAGTGACATTGACGAGGAAAGGGAAAATGCGACGAGGGTGCCAGAAGATGTTAAGGAAGGACATTTTGCTGTTATTGCAATTCACGGTGAAGAGACCAAAAGGTTCGTTGTTGAGTTAGATTATTTAACTGATCCTGCTTTCTTGAAGCTGCTGGAGCAAGCCAGTGAAGAGTATGGCTTTCAACAAAAGGGTGCACTTGTAGTTCCTTGCAGCCCTCAAGAACTTCAGAAGATTATAGACAACAAACGACTCAATGTCACTTCCTAA 375 0.4373 MEVGKKKMLKSLISKVMKGVPFLAPNGARTRRVCYVSDIDEERENATRVPEDVKEGHFAVIAIHGEETKRFVVELDYLTDPAFLKLLEQASEEYGFQQKGALVVPCSPQELQKIIDNKRLNVTS 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02375 124 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 37 114 IPR003676 GO:0009733
Vian2g02375 124 Pfam Auxin responsive protein 18 115 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02375 Vian-Chr2 44159059 44159433 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02375 38 106 Calmodulin-binding Proteins AT5G20810 44.928 5.83e-14 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02375 - K14488 gmx:102661602 201.83