Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02368 ATGAAGGGGAAGTTTCTGAGAGGGTGTCTTAACAAGTGGAAGAAAGTGGGGAGTCGAGTGATCCAGTGTGGTGCCTACGGTTACTGCTGCGAATGGGAAGTGTGGCCATGGATGCAGAATGAAGGAGAATCTGATATTCCGAACGATGTGCCAAAGGGTCATTTGGTTGTGTACGTGGGAGAACACCACAAGAGATATGTGATAAAGATCACGTTGCTCCATCATCCTCTCTTCAAGACCTTGCTGGATCAGGCTCAGGATGAGTACGATTTCATTGCAGATTCAAAGCTCTATATTCCTTGCACTGAGCATCTTTTCCTCACTGTCCTTCGCTGTGCAACCTCTCCACATAATCAACGACTCTCTCTCTGCGTCTGA 378 0.4735 MKGKFLRGCLNKWKKVGSRVIQCGAYGYCCEWEVWPWMQNEGESDIPNDVPKGHLVVYVGEHHKRYVIKITLLHHPLFKTLLDQAQDEYDFIADSKLYIPCTEHLFLTVLRCATSPHNQRLSLCV 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02368 125 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 27 108 IPR003676 GO:0009733
Vian2g02368 125 Pfam Auxin responsive protein 41 112 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02368 Vian-Chr2 44102561 44102938 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02368 44 120 Calmodulin-binding Proteins AT4G34750 43.210 5.95e-18 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02368 K14488 - gmx:100793017 216.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02368 2 44102561 44102938 Vian2g02368 2 44102561 44102938 ECH