Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02355 ATGAGATGGCAACATGAAGAGCCAGGTGAAGATGACGATGGAAACTTTCGCATATTCACTTACAGAGAATTGAATTCTGCCACGCGGGGTTTTCATCCCTCGGAAAAGATTGGAGAAGGAGGCTTTGGCTCTGTCTATAAGGGGCAGCTTCGGGATGGAAGTTTGGTGGCTGTTAAAGTGCTTTCGATTGAGCTAGATTCCGTAAAAGGAGAGAGGGGTTTTGTGGCAGAATTGAATACACTTGCAAATGTGAAGCACCAAAATCTAGTTATTCTTCGAGGGTGTTGTGTTGAAGGAGCCCACAGATACATAGTCTACGATTATATGGAAAACAATAGCCTTCGTCACACTTTCTTAGGTTCTGAGCAAAAAAGAATGACATTCAGCTGGGAGGCTCGGAGAGATTCCTGGGCAGCGTACGAGGAAAAAGATCTTTTGAGAATGGTGGATCCAATGCTGAAGATGAACTATCACATGGAAGAAGCTAAACGGTTCCTAATGGTGGGACTTTGTTGCGTGCAAGAAACGGCCAGGGTGAGGCCACGAATGTCAGAGGTTGTAGACATGTTGAGCAAAAACATTGAGATGGAGGAGTTTCAAGTTTCACGACCAGGATTTGTGAATGATATGAGGAACGCCAGAACGAGGAGGCAAGTAAATTCATCGGAGGAATCAAGTGCTAGTGCAGCAGCATCCTTTGCAGATTCCTCCGGATGGAGTACCTCCAATCTTGCTCGTTAG 741 0.4548 MRWQHEEPGEDDDGNFRIFTYRELNSATRGFHPSEKIGEGGFGSVYKGQLRDGSLVAVKVLSIELDSVKGERGFVAELNTLANVKHQNLVILRGCCVEGAHRYIVYDYMENNSLRHTFLGSEQKRMTFSWEARRDSWAAYEEKDLLRMVDPMLKMNYHMEEAKRFLMVGLCCVQETARVRPRMSEVVDMLSKNIEMEEFQVSRPGFVNDMRNARTRRQVNSSEESSASAAASFADSSGWSTSNLAR 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02355 246 FunFam Serine/threonine-protein kinase receptor 2 108 - -
Vian2g02355 246 Pfam Protein tyrosine and serine/threonine kinase 34 130 IPR001245 GO:0004672|GO:0006468
Vian2g02355 246 ProSitePatterns Protein kinases ATP-binding region signature. 37 59 IPR017441 GO:0005524
Vian2g02355 246 SUPERFAMILY Protein kinase-like (PK-like) 17 134 IPR011009 -
Vian2g02355 246 MobiDBLite consensus disorder prediction 215 246 - -
Vian2g02355 246 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 136 234 - -
Vian2g02355 246 Gene3D Phosphorylase Kinase; domain 1 3 108 - -
Vian2g02355 246 ProSiteProfiles Protein kinase domain profile. 31 246 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian2g02355 246 Gene3D Transferase(Phosphotransferase) domain 1 109 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02355 Vian-Chr2 43917995 43919913 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02355 136 237 Receptor kinase-like Gene Family AT1G53440 30.769 2.52e-07 49.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vian2g02355 PK_Tyr_Ser-Thr 1.6e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02355 - - gmx:100785251 241.506