Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02337 ATGGGGAGGAAGGGAAATTGGTTTTCAAGCGTGAAGAAAGCTCTCAGCCCCGACTCAAAGGAGAAGAAAGATCAGAAATCAAGTAAATCTAAGAAGAAATGGTTTGGGAAGCAAAAATTACAGACTTCTGTCTCATACTCAGAAGCTGATAAGCTGCCACCGCCACCATCTGTTCCTCTGCCAGAAGAGATTAAATTAACTGATATTGAAAATGAAATCAGTCATGATCATGTTGTTGAAGTTGTAACTGCCGTTGAAGCCGAGGTACCTGTTCCTCCTGTTCAGATAGAAACTGTTAGGGTTGAAGCTGCTCGAATTCCTCGTTTTGCTGGTAAACCAAATGATGAAGTGGCAGCAATCAAAATTCAAACAGCTTTTCGGGGATACTTGGCAAGAAGAGCATTGCGGGCTTTAAGGGGACTGGTCAGGCTGAAATTACTGATGGAAGGGTCGGTTGTAAAACGCCAAGCCACGAGTACCCTCCGATCTATGCAGACACTGTCTCGCTTGCAGTCTCAGATTCGTTCCAGGAGGATCAGAATGTTGGAGGAGAATCAGGCTCTGCAGAGACAGCTCTTACAGAAACATGCAAGAGAGCTTGAGAGTTTGCGGATGGGAGAGGAATGGGATGACAGCCTACAATCAAAAGAACAAATCGAGGCCAAGTTACTAAGCAAGTATGAGGCTGCTATGAGGAGAGAAAGAGCATTGGCTTATGCATTCACTCATCAGCAAAACTGGAAGAACTCATCTAGATCTTTAAATCCTATGTTCATGGATCCAACAAATCCTGCCTGGGGTTGGAGCTGGTTGGAACGATGGATGGCAGCCCGACCATTAGAGAACCGTAGCCAGGTGGATAAAGAGTTAAATGATCATGGATCCGTGAAAAGCTCAAGCCGCGGCATTACTGGTGGAGAAATCAGCAAGTCATTTGCTCGTTTTCAGCTCAATTCTGAGAAGCACTCTCCAACAGCCAGCCAAAATCCTGGCTCACCAAGCTTTCAGTTCACTCCTTCCAAGCGAGTTTCGGCATCTGCTAAGAAATCAAAGAAGGCAAGTCCAAGGGGCAGCTGGATTACAGACGAGGACTCTAAAAGCTTGGTGAGTGTCCAGTCAGATCGGTTCCGGAGGCACTCGATCGCAGGTTCATCGGTGAGAGACGATGAGAGCCTTGCCAGCTCTCCAGCAATTCCAAGCTACATGGTGCCAACTCAATCTGCAAAAGCCAAATCCAGGACACAAAGTCCATTAGCCCCAGAAAATGGAAAAACTGAGAAAGGATCCTTTGGGACTGCAAAGAAGCGGCTATCTTTCCCAGCTTCACCTTCCAGGCCAAGGCGCCATTCAGGTCCACCAAAGGTAGAAATCAGCTTAAATGCGGAGTTATCTGTGGACAAAGTTGTGGACAGTTGA 1416 0.4668 MGRKGNWFSSVKKALSPDSKEKKDQKSSKSKKKWFGKQKLQTSVSYSEADKLPPPPSVPLPEEIKLTDIENEISHDHVVEVVTAVEAEVPVPPVQIETVRVEAARIPRFAGKPNDEVAAIKIQTAFRGYLARRALRALRGLVRLKLLMEGSVVKRQATSTLRSMQTLSRLQSQIRSRRIRMLEENQALQRQLLQKHARELESLRMGEEWDDSLQSKEQIEAKLLSKYEAAMRRERALAYAFTHQQNWKNSSRSLNPMFMDPTNPAWGWSWLERWMAARPLENRSQVDKELNDHGSVKSSSRGITGGEISKSFARFQLNSEKHSPTASQNPGSPSFQFTPSKRVSASAKKSKKASPRGSWITDEDSKSLVSVQSDRFRRHSIAGSSVRDDESLASSPAIPSYMVPTQSAKAKSRTQSPLAPENGKTEKGSFGTAKKRLSFPASPSRPRRHSGPPKVEISLNAELSVDKVVDS 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02337 471 Pfam IQ calmodulin-binding motif 118 136 IPR000048 GO:0005515
Vian2g02337 471 SMART iq_5 114 136 IPR000048 GO:0005515
Vian2g02337 471 MobiDBLite consensus disorder prediction 319 344 - -
Vian2g02337 471 MobiDBLite consensus disorder prediction 398 422 - -
Vian2g02337 471 Gene3D - 97 140 - -
Vian2g02337 471 ProSiteProfiles IQ motif profile. 115 143 IPR000048 GO:0005515
Vian2g02337 471 MobiDBLite consensus disorder prediction 286 305 - -
Vian2g02337 471 MobiDBLite consensus disorder prediction 319 458 - -
Vian2g02337 471 MobiDBLite consensus disorder prediction 1 60 - -
Vian2g02337 471 PANTHER IQ-DOMAIN 5-RELATED 1 452 - -
Vian2g02337 471 Pfam Protein of unknown function (DUF4005) 383 447 IPR025064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02337 Vian-Chr2 43745342 43748416 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02337 1 456 IQD Protein Family AT5G03040 55.274 4.78e-156 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02337 - - gmx:100800080 708.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02337 2 43745342 43748416 Vian2g02337 2 43745342 43748416 ECH