Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02321 ATGCAATTCTGGACACATTTTCTTTCTTCTCCCAAACTTCGCAAACAAACACTGCAACACATCCATGGCAAATGCGTAAGTTACTTCTTCATTCTCCGTCGTATGAGATTTATTCATGAATTATTAATTGAAACAGGTTCTCTCACTCCTCTTCGTCATTCAGCGGCGTGCAAAAAGCTCGTATTCCCCCCCCCTAACTTCCACCTCCAAGCCACCTCCTCTTTTCGACGGAACCACCAGGTTGTATATCAGTTATCTTTGTCCCTATGCGCAGAGTGTTTGGATCACTCGGGACTACAAGGTACCATCATTGGAGCACAATGGGATGGTCTTGGGAGAAAGTCTCCATTTGATGAAATACATAGAGGACAATTTCGAAGGTCCATCACTGATTCCCCAGATCCTGTCAAGAAAGAATTTGGTGAGCAGTTGATTTCTTATGTTGATACTTTCTCCAAAGAGCTGTATTCATTGAAAGCAGATCCGATACAACAAGCCAGAAAGTCCGGTCCTGCTTTTGATTACTTGGAGAATTCTCTTGGTAAATTTGATGATGGTCCATTCTTTCTTGGTCAATTTAGCTGGGTGGTTATTGCCTATGTTCCATTTGTTGAAAGATTCCAGCTCTTCCTTTTTGAGTTGTTCAAACATGATATAACTGAAGGAAGACCTAAACTTGCATCATGGATTGAGAATGTCTCTGATCTTTCTCATGCCTTTGACAATGGAGCCTCAAGACCAACTGCTTCAAACTTGCTGGTTACAGAAGATATATTCATTTGTGAAAATATGTTTCTTGTGCAGGAAGTGAACAAGATTAATGTGTATACACAAACAAGAGGTGATCCAAAGGATATTCTTGATCTTTTCAAGAAACGGTTATTGGGCAGTGTTTGGATTCAAGGCGGCGTGCAAGAAGCTCGTATTCCCCCGCTAACTTCCGCTTCCGAGCCACCTCCTCTTTTCGACGGAACCACCAGGTTGTATATCAGTTATATTTGTCCCTATGCGCAGCGTGTTTGGATCGCTCGGAACTACAAGGGACTACAGGACAAGATCGAACTGGTTCCTATTGATCTTCAAAACAGACCTGCCTGGTATAAGGAGAAAGTCTACCCAGAAAACAAGGTGCCATCATTGGAGCACAATGGGAAGGTCTTGGGAGAAAGTCTCGATTTGGTCAAATACGTAGATGTCAACTTCGAAGGTCCATCTCTGGTTCCCAGTGATCCTGCCAAGAAAGAATTTAGTGAGCAGTTGATTTCTTATGTTGATACTTTCACCAAAGAGCTGTATTCTGCATTGAAAGGAGATCCAATACAACAAGCCAGTCCTGCTTTTGATTACTTGGAGAATTCTCTTGGTAAATTTGATGATGGGCCATTTTTTCTTGGTCAATTTAGCTGGGTGGATATTGCCTATATTCCATTTGTTGAAAGATTCCAGCTTGTCTTTTTCGAGGTGTTCAAACATGATATAACTGAAGGAAGACCTAAACTTGCAGCGTGGATTGAGGAAGTGAACAAGATTAATGCGTATACACAAACAAGAGGCTCAACAGTAAAAGCCAGAGAGTCATCATCTAAGATGTAG 1593 0.4175 MQFWTHFLSSPKLRKQTLQHIHGKCVSYFFILRRMRFIHELLIETGSLTPLRHSAACKKLVFPPPNFHLQATSSFRRNHQVVYQLSLSLCAECLDHSGLQGTIIGAQWDGLGRKSPFDEIHRGQFRRSITDSPDPVKKEFGEQLISYVDTFSKELYSLKADPIQQARKSGPAFDYLENSLGKFDDGPFFLGQFSWVVIAYVPFVERFQLFLFELFKHDITEGRPKLASWIENVSDLSHAFDNGASRPTASNLLVTEDIFICENMFLVQEVNKINVYTQTRGDPKDILDLFKKRLLGSVWIQGGVQEARIPPLTSASEPPPLFDGTTRLYISYICPYAQRVWIARNYKGLQDKIELVPIDLQNRPAWYKEKVYPENKVPSLEHNGKVLGESLDLVKYVDVNFEGPSLVPSDPAKKEFSEQLISYVDTFTKELYSALKGDPIQQASPAFDYLENSLGKFDDGPFFLGQFSWVDIAYIPFVERFQLVFFEVFKHDITEGRPKLAAWIEEVNKINAYTQTRGSTVKARESSSKM 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02321 530 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 324 405 IPR004045 -
Vian2g02321 530 FunFam Lambda class glutathione S-transferase 403 529 - -
Vian2g02321 530 CDD GST_C_Lambda 410 517 - -
Vian2g02321 530 Gene3D Glutaredoxin 301 402 - -
Vian2g02321 530 SFLD Glutathione Transferase (cytosolic) 327 508 IPR040079 -
Vian2g02321 530 Pfam Glutathione S-transferase, C-terminal domain 441 505 - -
Vian2g02321 530 Pfam Glutathione S-transferase, N-terminal domain 328 404 IPR004045 -
Vian2g02321 530 SUPERFAMILY Thioredoxin-like 315 405 IPR036249 -
Vian2g02321 530 Gene3D - 131 250 - -
Vian2g02321 530 Gene3D - 403 530 - -
Vian2g02321 530 PANTHER GLUTATHIONE S-TRANSFERASE L1 304 520 IPR044629 GO:0004364
Vian2g02321 530 FunFam Glutathione S-transferase L2, chloroplastic 300 402 - -
Vian2g02321 530 SUPERFAMILY GST C-terminal domain-like 134 237 IPR036282 -
Vian2g02321 530 SFLD Main (cytGST) 327 508 - -
Vian2g02321 530 SUPERFAMILY GST C-terminal domain-like 401 517 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02321 Vian-Chr2 43577683 43584147 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02321 306 517 Glutathione S-transferase Gene Family AT5G02790 69.340 1.56e-108 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02321 K00799 - gmx:100793025 411.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02321 2 43577683 43584147 Vian3g02074 3 26983941 26986149 ECH
Vian2g02321 2 43577683 43584147 Vian2g02321 2 43577683 43584147 ECH
Vian2g02321 2 43577683 43584147 Vian3g02074 3 26983941 26986149 PCT