Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02301 ATGAGAAAGCTGTGTTTTAACCCCAAGACGGCGTCGTTCGCCTTGGCCCGCAATTCTCCTTCTTCGCCACAATCTTTAATCTCAAGCCCTACACCGCCCAGGCTCAGTTTTTCAGAACCTGGCAGCGTCGTCGACGAAGATAGTTTCATGGAGGAAGCAGAGGCAATCATACTCAAATGGAACCCTGACTCCTCGGCCTACGCCAAAGTCACTTCCCTATTTTACCAAGACAAAACGGAAGCCAAACACTACATTAACTGCGTTAATCAGCTTCACCAAACCATGCATTCCTTGATCTCTCACAGCCCTTCCTCTCATAAACTCGTCCTCGCTCACAACCTAATGCAGATCGCCATGAAAAGACTCAAGAAAGAGTTCTACCAGATCTTATGCATGAACCGCGCTCACCTTGACCCCAAATCTGTGTCCGCCAGATCCTCTCGCACCTCCGCCAATTCCAGCTGCTCCGATTGCGACGACGACTTCGCGGCCGAAGACGACGATATCCGTGCCGCCGGCGACTCTATCACCGAAGTCGAACAGGTTTCCTCAGGCGCCATGGCGGATCTAAAGTTAATTGCCGACTGCATGGTCTCTTCCGGCTACGCAAAGGACTCGTCGCGCGCAAACAAGATGGACTGGGAAGTGCTTGATTTGAAAATCAAGAGTTGGTTGGAGGCGGTGAGGATTGCCGTTAGAACGCTGTTTAACGGAGAGAGAATCCTCTGCGACAACGTCTTCAGTTACTCAGATTCCGTAAGAGAATCCTGCTTCGCCGAGATTTCCAGAGACGGCGCCTCTCTCCTTTTTGGATTCCCCGAACTCGTTGCCAAAACAAAGAAATCGTCGCCGGAGAAGCTGTTCCGCGTGCTCGACATGCACGCTGTGGCTTCAGAACTGTTGCCGGAGATCGAGTCCATATTTTCCTCCGATTACAACTCCGTCGTGCGTTCTCAGGTCCTCACTTCACTTCAACGACTCACCGAGTCTGCGCAATTCTTGCTCACTGAGTTCGAGTCCACGATGCAGAAAGACTCTTCCAAGACTGCGGTGAACGGCGGCGGCGTGCACTCGCTCACGATTCAGACAATGAATTATCTCGCAATCCTCGCAGATTACATCAACGTTCTCTCTGACATATTCCCGCGCGAGTGGCTTCCTCTGCCGAAGTCTTCGTTCCTGCCGGAGTCTTATTTATACAGTCCAGAGTCTGATTACTCAGTGTCGACGCCGGCGCTGACGGTGCGCATGGCGTGGCTGATTCTCGTCCTCCTTTGCAAGCTCGATGGCAAAGCGAAGCATTGCAAGGACGTTTCACTATCTTACTTGTTTCTCGCGAACAATCTCTGGTACGTGGTGGCCAGAGTCCGAAGCTCGAACCTGCAGTACGTGCTTGGCGATGATTGGATTACGAAGCACGAAGCTAAAGCGAAGAGGTTTGTGGCGAACTACGAGAAGGTAGCTTGGGGAGAGGTGGTTTCATCGCTGCCGGAAAATCCGGCCGCAGCGGAAGCGAGGGCGGTGTTCGAGAACTTCAACCTCAAATTCGAGGAAGCATATCGGAAGCAGAACTCGTTTGTGGTAGCTGATAGAGAACTGCGAGACGAAATAAAAGGTTCGATCGCGAGAAGTATTGTGCCGAAATATCGCGAGTGGTATAATGAGCTGCTTGCTTCGGTGGGATCAGTGAGGGACTTGACGGTGAGAGAGATTGTGACGTTTACCCCACAAGACATTGAAAATTACCTCGCTAACCTCTTCTTATTTGGAACGTCATCCAGTTCTGTATCCTCCTCGTCGGTAACTTCGTCCCCTCTCCGGCGTTGGAGTTGA 1833 0.5161 MRKLCFNPKTASFALARNSPSSPQSLISSPTPPRLSFSEPGSVVDEDSFMEEAEAIILKWNPDSSAYAKVTSLFYQDKTEAKHYINCVNQLHQTMHSLISHSPSSHKLVLAHNLMQIAMKRLKKEFYQILCMNRAHLDPKSVSARSSRTSANSSCSDCDDDFAAEDDDIRAAGDSITEVEQVSSGAMADLKLIADCMVSSGYAKDSSRANKMDWEVLDLKIKSWLEAVRIAVRTLFNGERILCDNVFSYSDSVRESCFAEISRDGASLLFGFPELVAKTKKSSPEKLFRVLDMHAVASELLPEIESIFSSDYNSVVRSQVLTSLQRLTESAQFLLTEFESTMQKDSSKTAVNGGGVHSLTIQTMNYLAILADYINVLSDIFPREWLPLPKSSFLPESYLYSPESDYSVSTPALTVRMAWLILVLLCKLDGKAKHCKDVSLSYLFLANNLWYVVARVRSSNLQYVLGDDWITKHEAKAKRFVANYEKVAWGEVVSSLPENPAAAEARAVFENFNLKFEEAYRKQNSFVVADRELRDEIKGSIARSIVPKYREWYNELLASVGSVRDLTVREIVTFTPQDIENYLANLFLFGTSSSSVSSSSVTSSPLRRWS 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02301 610 SUPERFAMILY Cullin repeat-like 45 587 IPR016159 -
Vian2g02301 610 MobiDBLite consensus disorder prediction 17 36 - -
Vian2g02301 610 MobiDBLite consensus disorder prediction 17 41 - -
Vian2g02301 610 Pfam Exo70 exocyst complex subunit 222 584 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vian2g02301 610 PANTHER EXOCYST COMPLEX PROTEIN EXO70 46 587 IPR004140 GO:0000145|GO:0006887
Vian2g02301 610 Gene3D Exocyst complex component Exo70 64 595 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02301 Vian-Chr2 43382809 43389555 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02301 50 587 EXO70 exocyst subunit family AT3G09520 51.130 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02301 K07195 - gmx:100810548 987.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g01706 3 19140674 19142569 Vian2g02301 2 43382809 43389555 PCT