Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02299 ATGCAGAGACCTAAAGGAAGCAAGCAGGTTCATCGACGTAGAAAACTCCAGAGTTTTCCCTCTGATTCTGGTTCTTGCAGTGATGGGGTTGCGGATGAAGATTCAGCATCATTTCAATTGGGGTTCGGGTCCTCGAAGCAACCGTTTGGAACTCCCATGAAGAAGCTATTAGCTGAAGAACTGTCCCGAGAAACTGAACCCAAAAGAAGAGCTCCCGGTGTCATAGGCAGATTAATGGGTCTTGATGGACTTCCGTTGCAATTGCCTGCTAATAAGCATCACAAGCATGTGTCAGAAAATAATGTGAAAGGGACAACACCGGCAGCGAAAACTCGAAGCAGTGGTAAACTATACGGCAGTCGAACATCTGGAAGATATTCAAAGAATCAACAAGAGTTTAAGGATGTGTTTGAGGTCTCAGAGATCTCAAACATAGAGGGTTGTAGGTATTCGTCCCAGGGGTCTGCAAAGTTGAAGATCACTGATGATGAAATGTCATTTGTTGAACAGAAATTCATGGATGCCAAACTCCGTGCAACTTATCAGGATTTACCGTCTTCCCAGGATTCCCATGATACACTCGAGATTCTAGACTCTAACAATGATCTTCTGCAAAAATACTTTAAGCGGCCAGATTCTTTGTTTAAAAGGCATCTAGATGATCTGCAAGGTTCCCCTTTCGAATCACATTTTGATCACATCAAAGGTACCAAATCATCAGATATAGAAAACTATGAACATGGTGACTTAAGCCCGAAGCCGGGTAGGGAGATAAAAGGGTTGAATTACAATAGATCTCATCAGAAGCATCGTGATGGTTATTCTTCCCATGTAATCAGAAAACAAGATACTCATAGTTCGCCAAAATCATCAAAGCTTCAGTTTCGGGGAAGAGGTGAGCCTGATGCAGTCCCAACAAGGATTGTTATCCTAAAACCTAATCTTGGAAAAGTGCAGAAAGCTACCAAAATTGGTTCACCACCTTGTTCTTCACATACTTCTCTGTTGGATTATGGAAAGTATCCTAAATTTTCAGATAGCAGATTTAGGGACGCTGAAGTGAATCAAAGGATAAATTTGCCTGATAATGCCTGGCATTCAAGGCAAAATTCTTTGGAATCAAGAGAAATTGCAAAGGAAATCACAAGCCAAATGAAAAATAATTTGAGTAATGGCTCCATGTTATTATCAACTTCTAGATTTAGAGGAAATACGTGGGACAATGGCTCATGTAGTTTTTCTGGGAATGAATCTCTTGAGGAATCAGAGGCGACACCTGCAACCTTGGGAAACTCATTTTACGTAAGTAATACTATCAGCCCATCATCATGTTTTAGTGAATCATTTGTGAGTAAAGAGGCAAAGAAGAGATTATCAGAGAGGTGGAAAATGTCACTCAAGTCTCAGCAGGGTCATTCTGTATCCAGGAGTGGTACTCTAGCTGAAATGCTTGCGACCCCTGATAAGGAATCTAAAACAGCTAATTTTGACAGCAGCCCTAGTGGGGGTTTACGTGATAAACTTTCTAGCAATGGTAAACCTGCTGGGTGGGTTGAACCATTGGGTATTAGCAGTAGGGATGGATGGAAGGATGGATGTATTGGAAGTTTACCAAGGTCTAAATCTCTTCCTGCTTCATCTACTACTTCTTTCGGAAGTCCTAGAACAATTTTGTACCATGAAGCTCTTCACGATGATCGATTTATGATGCCAAAGGTAGCCTGTAAACGGGAAAGGAAGAAAGTGGTGAAATGTCTTGATCAGAGACAGTGTATGAATACGAGAAACCTAAAAAGCAAGAAGTATCGGTGTCCTCATCCATCAAATCTAGAAGGCAATGAGTCATCCCCAGACTTGAATACAATTCAAAATAAAGTGAGGCTTAATCTTGAAGAGGATTTGCCGAAGCACGAAATGGTTGCCGCTGAATCATTAGCTGAGATCGATGGAGAAACTATTGCAGTTACTGAAGCTGTTGTGAATGTGGCAGATGAAAATGCAGTTGTTTCATCTGAATCTTATATTAAGGAGTTATCAGTTGGGTCTTCCGCTAAAAATTCTGTCCCGTTACAAACACCTGTATCTGGACTTGAATCTTCATGCTGTAAAGATGCGGATCAACCCAGTCCAGTCTCAGTGCTAGAACCTTCTTTTACTGATGATCTGTCATCGTGTTCCGAGTGTTTTGAAAGTCTCAGTGTTGACATACAAGGGCTTCGAATGCAACTTCAGTTGCTGAAGCTAGAATCTGAAGAATTTGTGGAAGGATCCGTGCTAATTCAAAGTGATGAAGATGGTGGGGAAGCATACACAGGAATTTCAGAAGACAACGGATTACTTAATGGAGATAGCTGGGAGTCTTCCTACATGATTGATGTCTTGTCTGAATCTGGAATTGATAGAGCTTTGCCTGATGCATTTTTGGAAGTTTGGCATTCTCTTGAATGCCCTGTTAGTCTTTCGGTGTTTGATGAGCTTGAAAAGAAGTACTCTGATTGGAGTACTTGCCCACGGTCCGAAAGGAGATTGCTTTTTGATCGTATCAATTGGGGAATTATCGACATATACGAGCAATTCGTTAGTGCACAACCATGGGTAATCCCTTCGAGAGCCACAAATCTTTGTTCTAGTTCGAAATTGATTAAAAGTGGACTCCAAGACTGTTTGTACAAGATGCTGTGGACTCAGGGAAAAGTAAAGGATACGACACTGGGGAAGGTGTTGGTTAGTGAATTGCAGTGGTTGAACTTAAGAGATGACATTGATGGAATAGGTAGCAAAGTTGAGAGCTTGCTACTTGATGATCTAGTGGCAGAGATAGCTGTTACATAG 2832 0.4138 MQRPKGSKQVHRRRKLQSFPSDSGSCSDGVADEDSASFQLGFGSSKQPFGTPMKKLLAEELSRETEPKRRAPGVIGRLMGLDGLPLQLPANKHHKHVSENNVKGTTPAAKTRSSGKLYGSRTSGRYSKNQQEFKDVFEVSEISNIEGCRYSSQGSAKLKITDDEMSFVEQKFMDAKLRATYQDLPSSQDSHDTLEILDSNNDLLQKYFKRPDSLFKRHLDDLQGSPFESHFDHIKGTKSSDIENYEHGDLSPKPGREIKGLNYNRSHQKHRDGYSSHVIRKQDTHSSPKSSKLQFRGRGEPDAVPTRIVILKPNLGKVQKATKIGSPPCSSHTSLLDYGKYPKFSDSRFRDAEVNQRINLPDNAWHSRQNSLESREIAKEITSQMKNNLSNGSMLLSTSRFRGNTWDNGSCSFSGNESLEESEATPATLGNSFYVSNTISPSSCFSESFVSKEAKKRLSERWKMSLKSQQGHSVSRSGTLAEMLATPDKESKTANFDSSPSGGLRDKLSSNGKPAGWVEPLGISSRDGWKDGCIGSLPRSKSLPASSTTSFGSPRTILYHEALHDDRFMMPKVACKRERKKVVKCLDQRQCMNTRNLKSKKYRCPHPSNLEGNESSPDLNTIQNKVRLNLEEDLPKHEMVAAESLAEIDGETIAVTEAVVNVADENAVVSSESYIKELSVGSSAKNSVPLQTPVSGLESSCCKDADQPSPVSVLEPSFTDDLSSCSECFESLSVDIQGLRMQLQLLKLESEEFVEGSVLIQSDEDGGEAYTGISEDNGLLNGDSWESSYMIDVLSESGIDRALPDAFLEVWHSLECPVSLSVFDELEKKYSDWSTCPRSERRLLFDRINWGIIDIYEQFVSAQPWVIPSRATNLCSSSKLIKSGLQDCLYKMLWTQGKVKDTTLGKVLVSELQWLNLRDDIDGIGSKVESLLLDDLVAEIAVT 943
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02299 943 MobiDBLite consensus disorder prediction 1 74 - -
Vian2g02299 943 MobiDBLite consensus disorder prediction 487 515 - -
Vian2g02299 943 MobiDBLite consensus disorder prediction 57 71 - -
Vian2g02299 943 Pfam Domain of unknown function (DUF4378) 787 939 IPR025486 -
Vian2g02299 943 MobiDBLite consensus disorder prediction 226 287 - -
Vian2g02299 943 MobiDBLite consensus disorder prediction 19 46 - -
Vian2g02299 943 Pfam Protein of unknown function (DUF3741) 169 213 IPR022212 -
Vian2g02299 943 MobiDBLite consensus disorder prediction 101 126 - -
Vian2g02299 943 PANTHER AFADIN 8 941 - -
Vian2g02299 943 MobiDBLite consensus disorder prediction 94 126 - -
Vian2g02299 943 MobiDBLite consensus disorder prediction 491 506 - -
Vian2g02299 943 MobiDBLite consensus disorder prediction 226 301 - -
Vian2g02299 943 Pfam DUF761-associated sequence motif 65 85 IPR032795 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02299 Vian-Chr2 43353996 43359232 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02299 48 942 TRM (TON1 Recruiting Motif) Superfamily AT3G53540 35.275 6.48e-126 403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02299 - - pvu:PHAVU_001G171300g 1604.73