Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02291 ATGGCTTGTTATCAACAAAAACTGTTTGAAAGACTGAAGCCATTCATAGGTGTAGTTTTCTTGCAGTTTGGATATTCTGGTATGGATGTTCTATCCAAGGCTGCACTCAACAGGGGAATGAGTAACTATGTATTTGTTGTGTACCGTCATGTTTTTGCCTTTGTTGTCATGGCCCCTTTTGCAGTGTTCTTGGAGAAGAAAGTGAGGCCGAAGATGACGTTTTCGATCTTCATGAAGATAGTGATTCTCAGCCTGCTAGAGCCAGTTATTGATCAAAATTTATACTTTTTGGGAATGAAGTACACCACAGCAACCTTTGCTGTTTCCATGTACAATGTTCTCCCTGCCATTACCTTTGTCATGGCTTGGATTCTTAGGCTTGAGAAGATAAAATTAAAAAGCACACGCAGTCAAGCAAAGGTGGTGGGAACTTTAGCAACTGTTGCAGGTGCCATGATCATGACACTGATAAAGGGTCCAATACTCGATCTATTTGGAACACACGCCAGCAATACAAACAACGTGCAAAATGGTGGGGTAAATCTTGAACATGCAATAAAGGGATCAGTGATGATCACAATTGGCTGCTTTAGTTGCGCTTGTTTCATGATTCTCCAAGCTATTACCATTGAAGCCTACCCTGCTGAACTCTCTCTTACAGCATGGATATGCTTATTGGGAACGGTTGAAGGTGGCATAGTGGCACTGGTTATGGAAAGGAATAATTTTTCAGCTTGGTCTCTGAAATGGGATACAAAATTGCTTGCTGCTGTCTACAGTGGCATAGTTTGCTCAGGAATGGCTTATTACATCCAAGGAGCTGTGATGAAAGATAGAGGTCCGGTCTTTGTGACAACTTTTAACCCTCTCTGCATGGTCATTGTGGCTATCATGGGCTCCTTCTTTCTGGCAGAACAAATGTACCTTGGAAGGGCAATTGGTGCTATCGTGATTATTGCAGGACTGTATCTGGTGGTGTGGGGTAAAAGCAAAGACTACGAGTCATCAAGTACGATTACTGAAGAGAATATGTTGTCAGCCAAGCAAACAGTAGAAAAGAGCAATAGCAAAGAAGAACATTTCAGTAACTTAGGCACCATAGCACGAGATGAACAAGTATGA 1122 0.4198 MACYQQKLFERLKPFIGVVFLQFGYSGMDVLSKAALNRGMSNYVFVVYRHVFAFVVMAPFAVFLEKKVRPKMTFSIFMKIVILSLLEPVIDQNLYFLGMKYTTATFAVSMYNVLPAITFVMAWILRLEKIKLKSTRSQAKVVGTLATVAGAMIMTLIKGPILDLFGTHASNTNNVQNGGVNLEHAIKGSVMITIGCFSCACFMILQAITIEAYPAELSLTAWICLLGTVEGGIVALVMERNNFSAWSLKWDTKLLAAVYSGIVCSGMAYYIQGAVMKDRGPVFVTTFNPLCMVIVAIMGSFFLAEQMYLGRAIGAIVIIAGLYLVVWGKSKDYESSSTITEENMLSAKQTVEKSNSKEEHFSNLGTIARDEQV 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02291 373 PANTHER WAT1-RELATED PROTEIN 14 337 IPR030184 GO:0016020|GO:0022857
Vian2g02291 373 Pfam EamA-like transporter family 21 154 IPR000620 GO:0016020
Vian2g02291 373 Pfam EamA-like transporter family 187 326 IPR000620 GO:0016020
Vian2g02291 373 SUPERFAMILY Multidrug resistance efflux transporter EmrE 248 331 - -
Vian2g02291 373 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02291 Vian-Chr2 43248226 43250903 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02291 5 363 Nodulin-like Gene Family AT2G37460 64.345 4.20e-173 485
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02291 - - vra:106757633 698.738