Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02280 ATGCCGTTGAACATAACATCCATCAAGACATCTTCTAATGGAGTGTGGCAAGGTGATAATCCTTTGGATTATGCCTTCCCACTCCTAATAGTTCAAATCACCTTAGTCCTCATCGTCACTCGCTCCCTCGCTTTACTTCTCAAACCTCTCCGACAACCCAAAGTCATTGCTGAGATTCTGGGTGGAGTTTTGCTGGGCCCATCGGTACTGGGAAGAAGCAAAAGTTATTTGCATCGTATATTCCCTTCATGGGGCACGCCAACGCTGGAATCTGTCGCAAGCATAGGTCTTCTTTTTTTCCTATTCCTCGTAGGTTTGGAGCTCGATCTCCATTCCATTCGTCGGAGCGGCAAAAGAGCCTTCAGCATCGCCGCCGTGGGGATCTCTCTTCCTTTCGTCTGCGGAATCGGCGTCGCCATCATCCTCCGCAAAACAGTTGAAGGCGCAGACGAACCCGGCTTCGCGCAGTTCATCGTCTTCATGGGCGTGGCGCTTTCCATCACCGCATTCCCGGTGCTGGCCCGCATCCTGGCAGAGCTGAAGCTCCTCACCACGCGAGTGGGGGAGACCGCGATGGCGGCGGCGGCGTTCAATGATGTGGTCGCGTGGATTCTGCTCGCGTTGGCAGTGGCTTTGGCGGGGAATGGCAGTGGGTCCCATAAGAGTCCTCTGGTATCGGTGTGGGTTCTTCTCTCGGGGCTGGCGTTCGTGGTTTTGATGATGGTGGCTGTCCGACCGGTGATGGAGGTTGTGGCTAGAAGGGGCGAAAACGACGCCGCTGACGAGTTTTATGTTTGTTTGACGCTAGCGGGGGTGTTGGTGTCGGGGTTTATGACGGACCTGATCGGGATTCACTCCATATTCGGGGCCTTCGTGTTCGGGCTAACGATTCCGAAGGAGGGAAACTTCGCGAAGAAGCTAACAGAGAGAATCGAGGATTTTGTTTTAGGTTTGTTGCTCCCACTCTACTTTGCTTCTAGCGGTTTGAAAACCGATGTAACTACCATACGTGGCGCTTCAGCGTGGGGTCTTCTGGTTCTGGTCATAGCCACGGCTTGTGCTGGGAAGATTCTTGGGACCTTCGTGGTAGCCATGTTCTGCATGATCCCCGCCAGAGAATCGCTCACACTTGGCGTCCTCATGAACACCAAAGGCCTTGTTGAGCTTATCGTACTCAACATTGGAAAGGAAAAAAAGGTTTTAAATGATGAAATGTTTGCAATCTTAGTTCTTATGGCTCTGTTCACCACCTTCATCACAACACCGATAGTAATGGCAATCTACAAACCAGCTCGAGGAAACTCAGTGAAAGCCCGGCGAAAGCTCGGTGACGATTCTTTGGGGTCTGGGAAGGAAATGGTTGAGAAGCTCAGAGTCTTGGCCTGTCTCCATGGGCCAAGCAATATCCCTTCTGTCATCAATTTGATTGAATCAACTCGAAGCACAAAAAAGTCCTTGATAAAGTTGTTCATGATGCACCTTGTTGAGCTCACAGAACGCTCATCCTCTATCATCATGGTTCATCGTGCTCGTAGAAATGGTTTCCCCTTCTTCAACCGCTCTCATCGTGACCAGTGGCATGACCGAATTGCAGGAGCCTTTCAAGCCTACACTCAACTAGGTCGAGTCATGGTTCGGTCCACAACTACTATTTCTTCTCTCTCCACCATGCACGAGGACATATGCCACGTGGCGGAGGAGAAAATGGTCACCATGATTATTTTGCCCTTCCACAAACAGTGGAGAACAGAAGTGAATGGGGACAACGAGAAATATCAAGTGGAAGAAAATGCAGGCCACGAATGGAGAGTGGTCAACCAAAAGGTACTTAAGAATGCACCTTGTTCAGTGGTCGTGCTTGTGGATCGTGGATATGGAAATTTGCCTGAAACTCCAATCCCAGATTCCATTGTTTATCAACGAGTGTGCATCATCTTCTTCGGTGGCCCAGATGATCGTGAGGCTCTAGAGTTGGGTAAGAAGATGCTTGAACACCCAACAGTTAAAATACGTGTTGTAAGGTTTATGGAAAAGGGTGTGTTGGATGATAATAACATTGTGTTAAACTTCTCACCTGACAAAAACAAAGACGATAGTTACAGCTTCTCCACTGCCAAAATGAATCGCCAGCAAGAAAAGGAGTTGGATGAGGAGGCAATTAAGCAGTTTCAAAGCAAGTTGAATGACATGGTGGAATACGTTGAGAAGTTTAGTGAGGACGTTGTGGAAGACGTATTGATAATAGGAAAAAGTGGGGATTATGATCTGATAATTGTTGGAAAAGGTCGATTCCCATCGAATATGGTGGCTGGTTTAGCAGAAAGAAAACCAGAACATGCTGAGTTAGGTCCTATTGGAGATGTTTTATCTTCATCAGAACATGAGGTTTTGTCATCTGTATTGGTTATTCAACAACACGATGTGACATTGGTAGATGATGCTCCTGTATGCAAGGTCCATGATGAGTATGGCACTGTCAATACTGCTTATTCTTCTCATGGAGTGGGAATTTCAATTGGCAATGACAATGCAGTGTAA 2538 0.4795 MPLNITSIKTSSNGVWQGDNPLDYAFPLLIVQITLVLIVTRSLALLLKPLRQPKVIAEILGGVLLGPSVLGRSKSYLHRIFPSWGTPTLESVASIGLLFFLFLVGLELDLHSIRRSGKRAFSIAAVGISLPFVCGIGVAIILRKTVEGADEPGFAQFIVFMGVALSITAFPVLARILAELKLLTTRVGETAMAAAAFNDVVAWILLALAVALAGNGSGSHKSPLVSVWVLLSGLAFVVLMMVAVRPVMEVVARRGENDAADEFYVCLTLAGVLVSGFMTDLIGIHSIFGAFVFGLTIPKEGNFAKKLTERIEDFVLGLLLPLYFASSGLKTDVTTIRGASAWGLLVLVIATACAGKILGTFVVAMFCMIPARESLTLGVLMNTKGLVELIVLNIGKEKKVLNDEMFAILVLMALFTTFITTPIVMAIYKPARGNSVKARRKLGDDSLGSGKEMVEKLRVLACLHGPSNIPSVINLIESTRSTKKSLIKLFMMHLVELTERSSSIIMVHRARRNGFPFFNRSHRDQWHDRIAGAFQAYTQLGRVMVRSTTTISSLSTMHEDICHVAEEKMVTMIILPFHKQWRTEVNGDNEKYQVEENAGHEWRVVNQKVLKNAPCSVVVLVDRGYGNLPETPIPDSIVYQRVCIIFFGGPDDREALELGKKMLEHPTVKIRVVRFMEKGVLDDNNIVLNFSPDKNKDDSYSFSTAKMNRQQEKELDEEAIKQFQSKLNDMVEYVEKFSEDVVEDVLIIGKSGDYDLIIVGKGRFPSNMVAGLAERKPEHAELGPIGDVLSSSEHEVLSSVLVIQQHDVTLVDDAPVCKVHDEYGTVNTAYSSHGVGISIGNDNAV 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02280 845 Pfam Sodium/hydrogen exchanger family 36 423 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vian2g02280 845 Gene3D - 486 782 - -
Vian2g02280 845 PANTHER CATION/H + ANTIPORTER 8 807 - -
Vian2g02280 845 Gene3D - 28 435 IPR038770 -
Vian2g02280 845 FunFam Cation/H(+) antiporter 15 28 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02280 Vian-Chr2 43079158 43083333 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02280 75 822 Antiporter Super Family AT3G53720 64.744 0.0 897
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02280 K26731 - gmx:100798644 1269.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02280 2 43079158 43083333 Vian2g02280 2 43079158 43083333 ECH