LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vian2g02265	ATGGAGAACTTTTTTCGCCTAGTGGACAACGAAGACTTCTTCTCTCGTCGTTGCATTTGGGTGAACGGCCCTATAATCGTAGGGGCAGGTCCCTCGGGGCTTGCCACAGCAGCATGCCTTAGAGAACAAGGGGTGCCCTTCATGGTTCTCGAACGAGCAGATTGCATAGCTTCTCTGTGGCAGAAACGAACCTATGACAGACTCAAGCTTCACCTCCCTAAGCAATTCTGCCAGCTCCCCAAGCTCCCTTTCCCTGAAGACTTCCCCGAATACCCCACAAAGAAACAGTTCATAGAGTACCTAGAGTCCTACGCCACCCACTTCCAGATCAACCCTCAGTTCAACGAGTGTGTTCAGTCCGCAAGGTACGACGAGACAAGCGGATTGTGGCGGGTGAAGAGCGTTTCCTCCACTGGCGCCACACGCAACGAGGTGGAGTACATTTGCAGGTGGCTCGTGGTGGCCACTGGGGAGAATGCCGAGTGTGTGATGCCGGATATTGAAGGGTTGAGTGACTTCAAAGGTGAGGTCATCCATGCTTGTGATTACAAGTCAGGGGAAAGCTTCAGGGGAAAAAAGGTTCTTGTTGTTGGCTGTGGCAATTCCGGCATGGAGCTCTCTCTTGATCTTTGCAACCACCATGCTTCTCCTTCCATGGTTGTTCGCAGCTCGGTTCACGTGTTGCCCAGAGAAGTATTTGGGAAATCAACTTTTGAATTTGCGGTTATGATGCTGCAATGGCTGCCCCTTTGGCTTGTTGACAAGATTATCTTGTTGTTGGCATGGTTTGTTTTTGGGAACGTGGAGAAGTTGGGGCTGAAAAGGCCTTCGACGGGTCCTTTGGAGCTGAAAAACACAAAGGGAAAGACCCCGGTTTTGGATCTTGGTGCCTTGGCGAAGATTAGATCCGGTGATATAAAAGTGGTGCCAGGAGTCAAGAGGTTCAATAATGGAGAAGCTGAGCTTGTCAATGGTGAAAAGCTCGATGTCGATGCAGTGGTGCTGGCAACCGGTTACCGCAGTAACGTGCCTTATTGGCTTCAGGAAGGTGAATTTTTCTCAAAGAATGGATTCCCGAAGATGCCATTCCCTCATGGTTGGAAGGGAAATGCTGGACTTTATGCTGTGGGGTTCACGAAGAGAGGGCTCTCTGGTGCTTCTTCTGATGCTGTGAAAATCGCTCAAGATATTGGCAAAGTTTGGAAAGACGAGACTAAGCAAAAGAAACAGCGCACTACTGCTTGTCATAGAAGATGCATTTCTCAGTTCTAA	1272	0.4953	MENFFRLVDNEDFFSRRCIWVNGPIIVGAGPSGLATAACLREQGVPFMVLERADCIASLWQKRTYDRLKLHLPKQFCQLPKLPFPEDFPEYPTKKQFIEYLESYATHFQINPQFNECVQSARYDETSGLWRVKSVSSTGATRNEVEYICRWLVVATGENAECVMPDIEGLSDFKGEVIHACDYKSGESFRGKKVLVVGCGNSGMELSLDLCNHHASPSMVVRSSVHVLPREVFGKSTFEFAVMMLQWLPLWLVDKIILLLAWFVFGNVEKLGLKRPSTGPLELKNTKGKTPVLDLGALAKIRSGDIKVVPGVKRFNNGEAELVNGEKLDVDAVVLATGYRSNVPYWLQEGEFFSKNGFPKMPFPHGWKGNAGLYAVGFTKRGLSGASSDAVKIAQDIGKVWKDETKQKKQRTTACHRRCISQF	423

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vian2g02265	423	SUPERFAMILY	FAD/NAD(P)-binding domain	25	280	IPR036188	-
	Vian2g02265	423	PRINTS	FAD-dependent pyridine nucleotide reductase signature	24	43	-	-
	Vian2g02265	423	PRINTS	FAD-dependent pyridine nucleotide reductase signature	193	211	-	-
	Vian2g02265	423	PANTHER	FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220)	25	417	-	-
	Vian2g02265	423	PRINTS	Pyridine nucleotide disulphide reductase class-II signature	189	213	-	-
	Vian2g02265	423	PRINTS	Pyridine nucleotide disulphide reductase class-II signature	23	45	-	-
	Vian2g02265	423	Pfam	Flavin-binding monooxygenase-like	26	346	IPR020946	GO:0004499\|GO:0050660\|GO:0050661
	Vian2g02265	423	Gene3D	-	24	407	IPR036188	-
	Vian2g02265	423	FunFam	Flavin-containing monooxygenase	24	406	-	-
	Vian2g02265	423	SUPERFAMILY	FAD/NAD(P)-binding domain	191	399	IPR036188	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vian2g02265	Vian-Chr2	42858455	42860173	Dispersed/Wgd

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Vian2g02265	2	42858455	42860173	Vian2g02265	2	42858455	42860173	ECH
	Vian3g01337	3	14760154	14769017	Vian2g02265	2	42858455	42860173	PCT