Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02264 ATGGAGCAAGAAGAATACAAAAAAGAGGAAATTGATTGGAGTTACATTGAATTTGTGGACAATCAAGATATTCTGGATCTCATTGAAAAGAAACCTGGTGGCATTATTGCTCTTCTGGATGAAGCTTGCATGTTTCCTAGATCTACAAATGAAACTTTTGCCCAAAAGCTGTATCAGACCTTCAAAAACCATAAAAGGTTTAGCAAGCCTAAATTATCACGTAGTGACTTTACAATTTGCCATTATGCTGGAGATGTCACTTATCAAACTGAATTTTTCCTCGACAAGAATAAAGATTATATGGTTGCAGAGCACCAGGCACTTCTTTGTGCTTCAAAATGCCCCTTTGTATCGGGTCTGTTTCCTCCTTCACCTGAGGAATCTTCAAAACAATCAAAGTTCTCCTCCATTGGCTCACGATTTAAGCAACAATTGCAAGCTTTACTTGAAACTCTCAGTTCCACTGAGCCACATTACATTCGTTGTGTAAAACCCAATAATCTTCTCAAGCCAGCAATTTTTGAGAATAAAAATGTTTTGCTGCAACTACGTTGTGGGGGAGTTATGGAGGCAATTAGGATAAGTTGTGCCGGGTATCCTACAAGAAAAACCTTTGATGAATTTGTGGATCGATTTAGTCTTCTTGCACCTGAAGCATTGGATGGAAGTTCTGATGAGGTAACTGCTTGCAAGAGGATTCTAAAGAATGTTGGACTTGAAGGTTGTCAGATTGGTAAGACAAAGGTGTTTCTCCGAGCTGGCCAGATGGCAGAACTAGATACCCGTAGAAGTGAAATCTTAGGAAGGTCAGCAAGCATTATTCAGAGAAAAGTTCGGTCATATTTGCAACGCCGAAGTTTCATATTGCTTCGTCTGTCGGCTTTGAGGATTCAAACTGCATGCAGAGGACAACTTGCTCGGCAAGTGTACGAGGAAATGCGGCAGGAGGCTTCTAGTTTGGTGATTCAGAGGTGCTTCCGCATGCATATTGCTAGGAAGGCATACAATGATTTGTATGCTACTGCTGTCACTGTCCAGACTGGTATGAGGGGAATGGCTGCGCGTTGTGAGCTATACTTTAGAAAGAGGACTAAAGCAGCAATTGTCATTCAGAGCCACTGCCAGAAATACTTGGCACAACTTCATTTCACCGAACTAAAGAAGGCAGCAATTACAACACAATGTGCATGGAGAGGAAAAGTTGCTCGGCAAGAGTTGCGAAAGCTCAAGATGGCTGCAAGAGAAACAGGAGCTCTCCAAGCTGCCAAAAGTAAGCTTGAAAAACAAGTTGAAGACCTTACATTAAGGTTGCAGCTGGAAAAACGTTTGAGGGTTGACATGGAAGAAGCAAGAGCTCAAGAAAATCAAAGATTACAATCTGCTTTGCAAGAGATGCAACTTCAGTTTAAAGAAACTAAGTTACTTCTTGAAAAGGAGAAAGAGGCTACAAAAATAGCAGCAGAGAGAGCTCCCGTTATACAGGAGATTCCAGTTGTTGACCATGCTTTGTTGGAGAAGCTCAGTAGTGAGAATGAGAAACTCAAGAACATGGTGAGTTCACTGGAAAAGAAAATTGATGAAACAGAAAAAAAGTTCGAAGAAGCTAGCAAAATTGGTGAAGAAAGGTTAAAGCAAGCTTTGGATGCGGAATCAAAAGTAATCCAGTTGAAGACAGCTATGCAAAGGCTTGAAGAGAAATTCATAGACATGGAATCTGCAAACCATATTCTTCAGAAACAATCACTACTAAACTCATCTGTGAAAACAATAGCAGAACACCTGTCTTCCCCAGTAGACGAGAAATTAGAAAATGGTCACCATGTGGCAGAAGAGCTGAAACCTGTTGATACATTTGTTACGCCTGTGAAACAATTTGGTACAGAATCTGACTTCAAACTGAGGAGATCTTACATTGAACGACAACATGAGAGTGTTGATTCACTTGTTAACTGTGTTATGAAAAATATTGGCTTCAGTCATGGAAAACCCATTGCTGCATTCACCATTTACAAGTGTCTTCTCCACTGGAAATCTTTTGAAGCTGAAAGAACCAGTGTATTTGATCGCCTGATCCAAATGATTGGTTCTGAAATTGAGAATCAAGATGGCAATGATCATATGGCCTACTGGCTGTCGAATACATCTGCGTTACTGTTTTTACTTGAACAAAGTCTTAAATCTGGGAGTTCAACAAATGCTACCCCAGTTAGAAAACCACCTAATCCAACATCTCTCTTTGGAAGAATGACTATGAGTTTTCTTTCATCCCCTTCTTCTGCCAACCTTGCTGCCCCTCCATCCGATGTTGTACGCAAGGTAGAAGCTAAGTACCCTGCCTTGCTTTTCAAGCAGCAGTTGACAGCGTATTTGGAGAAAATATATGGCATCATTCGGGATAATTTGAAGAAGGATTTAACTGCGGTCCTTGCATTATGCATCCAGGCACCAAGAACTTCAAAGGGAGGGTTACGTTCTGGCCGATCCTTAGCTAAAGATTCCCCAATGGTTCACTGGCAGAGTACTATTGAATCCCTAAATACCCTCCTCTGTACATTGAAAGAGAACTTTGTGCCATCAGTTCTTATTCAAAAGATCTTCAGTCAGACATTCTCATATATTAATGTGCAACTTTTCAATAGTCTTCTTCTTCGACGTGATTGTTGTACATTCAGCAACGGGGAATATGTGAAAGCTGGATTAGCTGAATTAGAGCTGTGGTGCTGCCAAGCAAAGGAAGAGTATGCAGGATCATCATGGGATGAACTTAAGCACATAAGACAGGCTGTTGGATTCTTGGTTATTCATCAGAAGTACAGGATTTCCTACGATGAAATCATCAACGATTTATGTCCTATCTTGAGTGTTCAACAGCTATACAGAATATGTACACTTTACTGGGATGGTAACTACAATACTCGAAGTGTATCTCCAGATGTGCTTTCAAGCATGAGGATGCTAATGGCTGAGGACTCCAATAATGCTCAGAGTGATTCTTTCTTGTTGGATGACAGTTCTAGCATCCCCTTCTCAGTGGATGATCTTTCTACATCACTGCAAGAGAAGGACTTCTCAGACATGAAACCAGCGGATGAGCTTCTTGAAAATCCAGCCTTCCAATTTTTGAACGAGTAG 3132 0.4087 MEQEEYKKEEIDWSYIEFVDNQDILDLIEKKPGGIIALLDEACMFPRSTNETFAQKLYQTFKNHKRFSKPKLSRSDFTICHYAGDVTYQTEFFLDKNKDYMVAEHQALLCASKCPFVSGLFPPSPEESSKQSKFSSIGSRFKQQLQALLETLSSTEPHYIRCVKPNNLLKPAIFENKNVLLQLRCGGVMEAIRISCAGYPTRKTFDEFVDRFSLLAPEALDGSSDEVTACKRILKNVGLEGCQIGKTKVFLRAGQMAELDTRRSEILGRSASIIQRKVRSYLQRRSFILLRLSALRIQTACRGQLARQVYEEMRQEASSLVIQRCFRMHIARKAYNDLYATAVTVQTGMRGMAARCELYFRKRTKAAIVIQSHCQKYLAQLHFTELKKAAITTQCAWRGKVARQELRKLKMAARETGALQAAKSKLEKQVEDLTLRLQLEKRLRVDMEEARAQENQRLQSALQEMQLQFKETKLLLEKEKEATKIAAERAPVIQEIPVVDHALLEKLSSENEKLKNMVSSLEKKIDETEKKFEEASKIGEERLKQALDAESKVIQLKTAMQRLEEKFIDMESANHILQKQSLLNSSVKTIAEHLSSPVDEKLENGHHVAEELKPVDTFVTPVKQFGTESDFKLRRSYIERQHESVDSLVNCVMKNIGFSHGKPIAAFTIYKCLLHWKSFEAERTSVFDRLIQMIGSEIENQDGNDHMAYWLSNTSALLFLLEQSLKSGSSTNATPVRKPPNPTSLFGRMTMSFLSSPSSANLAAPPSDVVRKVEAKYPALLFKQQLTAYLEKIYGIIRDNLKKDLTAVLALCIQAPRTSKGGLRSGRSLAKDSPMVHWQSTIESLNTLLCTLKENFVPSVLIQKIFSQTFSYINVQLFNSLLLRRDCCTFSNGEYVKAGLAELELWCCQAKEEYAGSSWDELKHIRQAVGFLVIHQKYRISYDEIINDLCPILSVQQLYRICTLYWDGNYNTRSVSPDVLSSMRMLMAEDSNNAQSDSFLLDDSSSIPFSVDDLSTSLQEKDFSDMKPADELLENPAFQFLNE 1043
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02264 1043 ProSiteProfiles IQ motif profile. 386 415 IPR000048 GO:0005515
Vian2g02264 1043 CDD MyosinXI_CBD 639 1012 IPR037975 GO:0007015
Vian2g02264 1043 Pfam DIL domain 865 967 IPR002710 -
Vian2g02264 1043 Gene3D - 365 414 - -
Vian2g02264 1043 Gene3D - 267 316 - -
Vian2g02264 1043 Gene3D - 317 364 - -
Vian2g02264 1043 PANTHER MYOSIN 1 977 - -
Vian2g02264 1043 ProSiteProfiles IQ motif profile. 338 367 IPR000048 GO:0005515
Vian2g02264 1043 Pfam Myosin head (motor domain) 2 252 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vian2g02264 1043 ProSiteProfiles Dilute domain profile. 688 989 IPR002710 -
Vian2g02264 1043 Gene3D - 1 155 - -
Vian2g02264 1043 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 319 415 IPR027417 -
Vian2g02264 1043 Coils Coil 504 538 - -
Vian2g02264 1043 ProSiteProfiles IQ motif profile. 290 319 IPR000048 GO:0005515
Vian2g02264 1043 FunFam unconventional myosin-Va 365 413 - -
Vian2g02264 1043 SMART MYSc_2a 1 265 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vian2g02264 1043 ProSiteProfiles IQ motif profile. 315 344 IPR000048 GO:0005515
Vian2g02264 1043 ProSiteProfiles Myosin motor domain profile. 1 264 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vian2g02264 1043 Gene3D - 199 265 - -
Vian2g02264 1043 Gene3D Kinesin motor domain 156 198 IPR036961 -
Vian2g02264 1043 Pfam IQ calmodulin-binding motif 388 407 IPR000048 GO:0005515
Vian2g02264 1043 Pfam IQ calmodulin-binding motif 293 310 IPR000048 GO:0005515
Vian2g02264 1043 Pfam IQ calmodulin-binding motif 269 287 IPR000048 GO:0005515
Vian2g02264 1043 Pfam IQ calmodulin-binding motif 318 335 IPR000048 GO:0005515
Vian2g02264 1043 Pfam IQ calmodulin-binding motif 364 383 IPR000048 GO:0005515
Vian2g02264 1043 Coils Coil 423 482 - -
Vian2g02264 1043 SMART DIL_2 864 971 IPR002710 -
Vian2g02264 1043 SMART iq_5 362 384 IPR000048 GO:0005515
Vian2g02264 1043 SMART iq_5 385 407 IPR000048 GO:0005515
Vian2g02264 1043 SMART iq_5 314 336 IPR000048 GO:0005515
Vian2g02264 1043 SMART iq_5 289 311 IPR000048 GO:0005515
Vian2g02264 1043 SMART iq_5 266 288 IPR000048 GO:0005515
Vian2g02264 1043 Coils Coil 546 580 - -
Vian2g02264 1043 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 317 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02264 Vian-Chr2 42817729 42829467 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02264 1 1042 Myosins gene family AT5G43900 71.401 0.0 1514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02264 K10357 - gmx:100795648 1873.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02264 2 42817729 42829467 Vian2g02264 2 42817729 42829467 ECH