Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02251 ATGGAGGAAGAGGGTAGTGTGAAAGCAGGAAGTAGTCTCCGAGCAGGCAGTACTAGGAGTAGTTTGAGGATTGGGAGTGTATCAGTTTGGAGGAACAGTGGTGTGGAAATGTTTGGCACCTCTTTCCACCAGGAAGATGATGAAGAGGCTCTTAAATGGGCTGCCATTCAGAAACTTCCTACCATGGCACGTTTGAGGACAGGCTTTCTGACTTCACCTCAAGGGGTTGCCAATGAGATTGATGTTCATCAACTGGGCTTGCAAGAAAGGAGAGGTTTGCTTGAAAGACTTGTCAGAGTTGCTGAAGAGGACAATGAGAAGTTCATGCTCAAGCTCAGGGAACGCATTGATAGAGTTGGAATTGCCATTCCTACAATAGAGGTCCGATTTGAGGGCATGAACGTTGGAGCAGAAGTTCATGTTGGTAGTAGAGCTGTGCCAACTCTCACTAACTACATGGTTAACAAAGTGGAGGGGCTATTGAACTTCCTACATCTGCTCCCAAGTAGAAAACAGCATATAAACATTATCCAGGATGTTAGTGGAATAATAAGGCCTGCCAGAATGACATTGCTGTTGGGCCCTCCAAGTTCTGGGAAGACCACTCTCCTGTTGGCCTTGGCTGGAAGACTTGATTCAAAACTTAAGTTCAATGGAAAGGTGACTTATAATGGCCATGGGATAAATGAGTTTGTACCCCAACGAACTGCTGCTTATGTCAGTCAAAATGATCTTCATACTGGAGAAATGACAGTCCGAGAAACCATGGCCTTTTCAGCACGAGTCCAAGGAGTTGGACCTCGTTATGATTTGCTAACAGAGGTGTCCAGAAGAGAAAAAGAAGCAAATATTACACCTGATCATGATATAGATGTCTATATGAAGATTCTTGGACTGGAGGTCTGTGCTGATACTGTTGTGGGAAATGAAATGTTAAGAGGTATATCTGGAGGACAAAGAAAACGTGTTACAACAGGGGAGATTCTGGTTGGACCAGCAAAGGCTCTATTCATGGATGAAATATCTACTGGTTTGGATAGTTCAACAACTTTTCAAGTTGTGAATTCACTCAAGCACTATATCCATTCTCTCAAAGGCACTGCTGTTGTTTCACTCTTACAACCAGCACCAGAGACTTACAATCTTTTTGATGACATTATTCTACTCTCTGATGGGCAAATTGTGTATCAGGGTCCCCGTGAACATGTTCTTGAATTTTTCGCTTCTGTGGGTTTCAAATGTCCTGAGAGGAAAGGTGTTGCAGACTTTTTGCAAGAAGTAACATCAAGGAAAGATCAGGAGCAATATTGGGTACAAAGAGACGAGCCTTACAGATTCGTCACAACCAAAGAGTTTGTAGAGGCATTTCAATCATTTCATGTTGCGAGAAGCCTGGCTAATGAACTTGATACTCAATTTGACAAGTCGAAAAGCCACCCTGCAGCTTTGGCAACCGAAAATTATGGGTTAGGAAAGTGGGAACTGTTTAAAGCTTGCTTGTCAAGAGAATATTTACTCATGAAGCGTAATTCATTTCTTCACATCTTCGAACTTTGCCGTGTAGTGGCCTTTATTGCAATGACTGTTCTTTTTCGGACTGAGATTCACCATGATTCAGTGACTGATGGTGGTATATATGTGGGTGCATTGTTCTATGTCCTTCTCATAACTTTGATAGATGGGTTTACTGATCTTACCGTGACAATTTCTAAGCTTCCGGTTTTTTACAAGCAAAGGGACCTTCTCTTCTTCCCTTCATGGATATATGTTCTTCCTGGATGGATCCTGAAAATCCCCGTGACTATTGCGCAAGTGGGAATCTGGGTGTTCCTCACCTACTATGTTATTGGTTTTGATCCATATGTTGGAAGACTCTTCAGGCAGTTCCTTCTTCTGTTAGTTGTTAGCCAGATGGCTTCATCCTTATTCCGGTTTATAGGAGCAGTTGGTAGGGAACTGACAGTAGGTTTCACCATTGGGTCATATCTATTGTCCATTCTCATTGCTATGAGTGGCTTCGTCTTGTCAAAAGACAATGTGAAAAAATGGTGGCTATGGGGCTTTTGGTCGTCACCTATGATGTATGGACAAAATGCCCTAGTAAATAATGAGTTCCTTGGTAAGAGGTGGAGACATGTTCTACCGAACTCAACTACACCATTAGGAGTTGAAGTTCTGAAATCTCGCGGGTTCTTCACTGAGCCGAAGTGGTATTGGATTGGTGTTGGGGCACTGTTTGGATATGCCGTAGTGTTCAATATCGCTTACATCCTCGCTCTCACTTACTTGAACCCAATAGAGCAGCATCAAGCTGTTAAATCAGAGGAATCTCAAAGCAATCCACGGGATGGTGGAAGCATTTCTACTAGTTCTTCGTCCAGAAGAAAAGAAGCTGAGAGAAGAGGAATGGTTCTTCCGTTTGAATCATATTCCATCACCTTTGATGATGTAACATATTCTGTTGACATGCCACAGGAAATGAAGAATCAGGGTGTTCTTGAGGATAGGCTGGAGCTTTTGAAGGGTGTCAGTGGCGCTTTCCGACCAGGAGTTCTCACAGCATTAATGGGTTCCACTGGTGCTGGCAAAACAACTCTGATGGATGTACTAGCTGGAAGAAAGACCGGGGGTTATATTGGTGGGAACATCACAATTTCTGGCTATCCAAAGAAGCAAGAAACCTTTGCAAGAATTTCTGGATACTGTGAACAAAATGATATCCACTCTCCCCATGTCACAGTATATGAATCTTTGCTCTATTCAGCATGGCTTCGATTATCAGCAGAAACCAATTCAGAAACCAGGAAGATGTTCATTGAGGAAGTCATTGGACTTGTGGAGCTGAACTCTCTAAAGCATGCAATTGTTGGATTGCCAGGTGTTAACGGTCTATCAACCGAGCAACGCAAAAGATTGACTATTGCTGTTGAGCTAGTGGCTAATCCTTCTATCATATTCATGGATGAGCCAACTTCTGGGCTAGATGCAAGAGCTGCTGCTATTGTCATAAGAGCAGTTAGAAACATAGTGGACACTGGAAGAACCGTTGTCTGCACAATCCATCAGCCTAGCATTGATATATTTGAATCTTTTGATGAGCTTTTTCTTATGAAGCGAGGAGGGCAAGAAATATATGTGGGGCCACTTGGACATCATTCTTCTAATTTAATCAGTTACTTTGAGGAAATTAAAGGGGTCACTAGGATTGAGGATGGCTACAATCCAGCAACGTGGATGTTGGAAGTCACAACTTCAGCAACAGAAATGGAAATGGGGATTGATTTTGCTGAAGTGTATAAAAATTCAGAGTTATACAGGAAAAACAAGGAAATGATCAAAGAATTGAGTACTCCAGTCACTGGTTCAAAGGACCTTCATTTTCCTAGAAAGTACTCAAGGTCCATCATTACTCAATGCATGGCTTGCTTATGGAAACAACATTTGTCTTACTGGCGCAATAATCAATACACTGCCCAAAGAATTCTCTACACAATCGCTTTGGCCTTGTTGTTTGGGAGCATTTATTGGGACCTTGGCTCCAAAATCAAAAAGCAACAAGATCTTTTCAATGCCATGGGATCCATGTATTCTGCTGTCCTCCTTCTTGGTGTTAAGAATGCTTTTTCATCACAACCGTTGGTGGCTGTTGAAAGAACTGTTTTTTATAGGGAAAAAGCTGCTGGAATGTATTCAGCTTTGGCATATGCTTTTGCTCAGGCAAACACTTGCTGGTCTAACTTTTCTGATCATAATATTTTCTTGCAGGTTGTAATCGAACTGCCTCATGTTCTTGTACAAAGTGTGGTTTATAGCCTTATAGTGTACGCAATGATCGGTTTTGAGTGGACTGTAGCTAAATTTTTCTGGTACCTTTTCTTCATGTACCTCACCTTCCTCTACTTTACCTATTATGGCATGATGTCTGCTGCATTGACCCCAAACCCCATCATTGCGATTATATTTTCTACTGGAATCTATGAAGTGTGGAATCTCTTCGCAGGATTCATAATCCCACGGCCAAGGATTCCTGTGTGGTGGAGATGGTACTATTGGGGAAATCCAGTAGCTTGGACTTTGTATGGGTTGGTGGCATCACAGTATGGAGATATTCAAGGAACTATTGATTTTAGTGGTAAAAGTACAACAGTGGAAGACTTTTTGAGAAAGTACTTTGGTTTTAGGCATGAGTTTTTGGGAGTGGTTTCAGCTGTACTAATAGTATTTGCAGTAACTTTTGCATGCATCTTTGCCATTGCAATTAAGTTGCTTAATTTCCAAAGACGTTAA 4287 0.4194 MEEEGSVKAGSSLRAGSTRSSLRIGSVSVWRNSGVEMFGTSFHQEDDEEALKWAAIQKLPTMARLRTGFLTSPQGVANEIDVHQLGLQERRGLLERLVRVAEEDNEKFMLKLRERIDRVGIAIPTIEVRFEGMNVGAEVHVGSRAVPTLTNYMVNKVEGLLNFLHLLPSRKQHINIIQDVSGIIRPARMTLLLGPPSSGKTTLLLALAGRLDSKLKFNGKVTYNGHGINEFVPQRTAAYVSQNDLHTGEMTVRETMAFSARVQGVGPRYDLLTEVSRREKEANITPDHDIDVYMKILGLEVCADTVVGNEMLRGISGGQRKRVTTGEILVGPAKALFMDEISTGLDSSTTFQVVNSLKHYIHSLKGTAVVSLLQPAPETYNLFDDIILLSDGQIVYQGPREHVLEFFASVGFKCPERKGVADFLQEVTSRKDQEQYWVQRDEPYRFVTTKEFVEAFQSFHVARSLANELDTQFDKSKSHPAALATENYGLGKWELFKACLSREYLLMKRNSFLHIFELCRVVAFIAMTVLFRTEIHHDSVTDGGIYVGALFYVLLITLIDGFTDLTVTISKLPVFYKQRDLLFFPSWIYVLPGWILKIPVTIAQVGIWVFLTYYVIGFDPYVGRLFRQFLLLLVVSQMASSLFRFIGAVGRELTVGFTIGSYLLSILIAMSGFVLSKDNVKKWWLWGFWSSPMMYGQNALVNNEFLGKRWRHVLPNSTTPLGVEVLKSRGFFTEPKWYWIGVGALFGYAVVFNIAYILALTYLNPIEQHQAVKSEESQSNPRDGGSISTSSSSRRKEAERRGMVLPFESYSITFDDVTYSVDMPQEMKNQGVLEDRLELLKGVSGAFRPGVLTALMGSTGAGKTTLMDVLAGRKTGGYIGGNITISGYPKKQETFARISGYCEQNDIHSPHVTVYESLLYSAWLRLSAETNSETRKMFIEEVIGLVELNSLKHAIVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVIRAVRNIVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVGPLGHHSSNLISYFEEIKGVTRIEDGYNPATWMLEVTTSATEMEMGIDFAEVYKNSELYRKNKEMIKELSTPVTGSKDLHFPRKYSRSIITQCMACLWKQHLSYWRNNQYTAQRILYTIALALLFGSIYWDLGSKIKKQQDLFNAMGSMYSAVLLLGVKNAFSSQPLVAVERTVFYREKAAGMYSALAYAFAQANTCWSNFSDHNIFLQVVIELPHVLVQSVVYSLIVYAMIGFEWTVAKFFWYLFFMYLTFLYFTYYGMMSAALTPNPIIAIIFSTGIYEVWNLFAGFIIPRPRIPVWWRWYYWGNPVAWTLYGLVASQYGDIQGTIDFSGKSTTVEDFLRKYFGFRHEFLGVVSAVLIVFAVTFACIFAIAIKLLNFQRR 1428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02251 1428 Pfam ABC-transporter N-terminal 101 151 IPR029481 -
Vian2g02251 1428 MobiDBLite consensus disorder prediction 773 799 - -
Vian2g02251 1428 Gene3D - 812 1057 IPR027417 -
Vian2g02251 1428 MobiDBLite consensus disorder prediction 773 792 - -
Vian2g02251 1428 Gene3D - 165 455 IPR027417 -
Vian2g02251 1428 Pfam ABC-2 type transporter 495 705 IPR013525 GO:0016020|GO:0140359
Vian2g02251 1428 Pfam ABC-2 type transporter 1137 1367 IPR013525 GO:0016020|GO:0140359
Vian2g02251 1428 Pfam ABC transporter 840 992 IPR003439 GO:0005524
Vian2g02251 1428 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 828 1050 IPR027417 -
Vian2g02251 1428 Pfam Plant PDR ABC transporter associated 710 772 IPR013581 -
Vian2g02251 1428 SMART AAA_5 186 400 IPR003593 GO:0016887
Vian2g02251 1428 SMART AAA_5 849 1041 IPR003593 GO:0016887
Vian2g02251 1428 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 13 1428 - -
Vian2g02251 1428 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 161 416 IPR003439 GO:0005524
Vian2g02251 1428 Pfam ABC transporter 178 341 IPR003439 GO:0005524
Vian2g02251 1428 CDD ABCG_PDR_domain2 811 1047 IPR034003 -
Vian2g02251 1428 FunFam ABC transporter G family member 40 826 1056 - -
Vian2g02251 1428 FunFam ABC transporter G family member 34 164 450 - -
Vian2g02251 1428 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 812 1065 IPR003439 GO:0005524
Vian2g02251 1428 CDD ABCG_PDR_domain1 166 398 IPR034001 -
Vian2g02251 1428 Pfam ABC-2 type transporter 374 468 IPR043926 GO:0140359
Vian2g02251 1428 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 173 415 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02251 Vian-Chr2 42674658 42682136 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02251 150 405 Calmodulin-binding Proteins AT2G36910 23.282 4.67e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02251 K08711 - gmx:100813417 2407.48