Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02245 ATGGAATCCAAATCCAAAATTCAACTCTTTTTCCTCACCCTTTCCCTCTTCACTCTCACCCTCGTCAACGCAGAAACGCTTGGAACTTACATAGTTCAGCTACACCCTCATGGGATCACCAGCTCTGCTTTCACCTCCAAGCTCAAATGGCACCTTTCATTCATCCAGCAAACCCTTTCCTCCGATGAGGACCCTTCTTCGCGCCTTCTCTACTCTTACCGTTCCGCCATGGACGGTTTTGCAGCTCAGTTAACCGAGTCTGAGCTTGAGTACCTCAAGAACTTGCCCGATGTTATCTCAATTAGGCCTGACAGCATGCTCCCGCTGCAGACCACTTACTCTTACAAGTTCTTGGGACTGAACCCTGCTCGAGAAAATGGTTGGAAGCTTATTGGTGCAAGGTACTTCACCAAAGGCCATTCTTCAGTGTCACCTTTTAGAATTCCGGAATATCTCTCTCCAAGAGACTCCTCTGGACATGGCACACACACTTCGTCCACGGCAGGAGGACTGCCTGTGCCTTTGGCGAGTGTGTTTGGTTACGCCTCTGGCGTGGCGAGAGGAATGGCTCCTGGTGCCCACATTGCGGTGTACAAAGTGTGCTGGTTCAATGGCTGCTATAACTCAGACATCATGGCTGCAATGGATGTGGCAATCAGAGATGGGGTGGACATTCTCTCCTTGTCTCTAGGTGGCTTCTCTACGCCTCTATATGATGATAACATTGCCATTGGAAGCTTTAGAGCAATGGAGCATGGGATTTCGGTGATATGTGCGGCGGGAAACAATGGTCCTACGGCAATGTCTGTTGCCAATGAGGCTCCTTGGATTGCCACCATCGGTGCAAGCACACTAGACAGGAAATTCCCAGCCACAGTTCGCATGGGAAATGGACAAATGCTCTATGGAGAGTCCATGTACCCACTGAACCATCCATTGAGCAATGGAAAAGAACTTGAACTGGTTTATCTGTCTGAAGGGGACACCGAGAGTCAATTTTGCCTCAGAGGGTCTCTTCCAAGGGACAAAGTTAAAGGCAAAATGGTGGTCTGCGATCGAGGCGTGAACGGAAGAGCAGAGAAGGGACAAGTGGTCAAGGAGGCTGGTGGCCTTGCTATGATTCTCGCCAACACGGAGATAAACTTGGGAGAGGATTCAGTTGATGTTCATGTCTTGCCTGCAACTTTGATTGGATTTGATGAAGCACTTACCTTGAAAGATTACATAAACTCCACAAGAAGGCCTCTTGCAAGGATTGAATTTGGAGGAACTGTGATAGGGAAGTCTAGAGCTCCAGCAGTGGCAAGATTTTCAGCTAGAGGACCAAGTTATACAAACCCTTCAATCCTCAAACCAGACGTTATAGCTCCAGGAGTGAACATCATTGCTGCATGGCCTCAGAATCTTGGTCCTACAGGCCTTCCAGAAGATTCTAGAAGAGTTAACTTCTCTGTCATGTCTGGCACCTCAATGGCATGCCCTCATGTTAGTGGAATTGCTGCTCTCATTCGCTCGGCTCACCCGACTTGGAGTCCTGCAGCCATCAAATCTGCAATCATGACAACAGCCGAGGTAACCGACCACACCGGAAGGCCTATTCTTGATGAAAACCAACCAGCAGGAGTTTTTGACATGGGAGCTGGACATGTGAATCCACAGAGAGCATTGAATCCTGGACTTGTGTATGACATTAGGCCAGATGATTATATCATCCACCTTTGCAGCCTTGGATACACAAAGTCAGAAATATTCAGCATCACACACAGAAATGTGAGTTGCAATGGAGTCTTGAAGATGAATAGAGGCTTCAGCCTTAACTATCCCTCATTCTCAGTGATATTTAAGGCTGGGGAGAGGAGAAAGATGTTCATCAGGAGACTAACAAATGTGGGAAATGCAAACTCCATCTACTCAGTGGAGGTTAAGGCACCTGAGGGAGTAAAAGTGATAGTAAAACCCAAGCGGCTTGTATTTAAGCAAGTGAATCAAAGCTTGGCTTACAGGGTATGGTTTATATCGAGAAAAAGGGTTAAAAAAGGTGATGGTTTGGTGACCTATGCAGAAGGGAATTTGACATGGGTACACTCACAAAATGGTTCCAACAGGGTCAGAAGCCCTGTGGCAGTGACTTGGAAGTCAAAGTAG 2145 0.4741 MESKSKIQLFFLTLSLFTLTLVNAETLGTYIVQLHPHGITSSAFTSKLKWHLSFIQQTLSSDEDPSSRLLYSYRSAMDGFAAQLTESELEYLKNLPDVISIRPDSMLPLQTTYSYKFLGLNPARENGWKLIGARYFTKGHSSVSPFRIPEYLSPRDSSGHGTHTSSTAGGLPVPLASVFGYASGVARGMAPGAHIAVYKVCWFNGCYNSDIMAAMDVAIRDGVDILSLSLGGFSTPLYDDNIAIGSFRAMEHGISVICAAGNNGPTAMSVANEAPWIATIGASTLDRKFPATVRMGNGQMLYGESMYPLNHPLSNGKELELVYLSEGDTESQFCLRGSLPRDKVKGKMVVCDRGVNGRAEKGQVVKEAGGLAMILANTEINLGEDSVDVHVLPATLIGFDEALTLKDYINSTRRPLARIEFGGTVIGKSRAPAVARFSARGPSYTNPSILKPDVIAPGVNIIAAWPQNLGPTGLPEDSRRVNFSVMSGTSMACPHVSGIAALIRSAHPTWSPAAIKSAIMTTAEVTDHTGRPILDENQPAGVFDMGAGHVNPQRALNPGLVYDIRPDDYIIHLCSLGYTKSEIFSITHRNVSCNGVLKMNRGFSLNYPSFSVIFKAGERRKMFIRRLTNVGNANSIYSVEVKAPEGVKVIVKPKRLVFKQVNQSLAYRVWFISRKRVKKGDGLVTYAEGNLTWVHSQNGSNRVRSPVAVTWKSK 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02245 714 ProSitePatterns Serine proteases, subtilase family, serine active site. 488 498 IPR023828 -
Vian2g02245 714 CDD PA_subtilisin_like 292 419 - -
Vian2g02245 714 FunFam subtilisin-like protease SBT1.5 286 426 - -
Vian2g02245 714 Gene3D - 573 711 - -
Vian2g02245 714 Gene3D Peptidase S8/S53 domain 129 569 IPR036852 GO:0004252|GO:0006508
Vian2g02245 714 Gene3D - 286 426 - -
Vian2g02245 714 Pfam Subtilase family 154 538 IPR000209 GO:0006508|GO:0008236
Vian2g02245 714 SUPERFAMILY Subtilisin-like 111 560 IPR036852 GO:0004252|GO:0006508
Vian2g02245 714 PRINTS Subtilisin serine protease family (S8) signature 487 503 IPR015500 -
Vian2g02245 714 PRINTS Subtilisin serine protease family (S8) signature 156 169 IPR015500 -
Vian2g02245 714 SUPERFAMILY Protease propeptides/inhibitors 51 107 - -
Vian2g02245 714 CDD Peptidases_S8_3 129 523 IPR034197 -
Vian2g02245 714 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 108 IPR037045 -
Vian2g02245 714 Pfam Peptidase inhibitor I9 29 108 IPR010259 -
Vian2g02245 714 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 128 709 IPR045051 -
Vian2g02245 714 Pfam Fibronectin type-III domain 605 709 IPR041469 -
Vian2g02245 714 SUPERFAMILY PA domain 296 405 IPR046450 -
Vian2g02245 714 ProSiteProfiles Serine proteases, subtilase domain profile. 1 556 - -
Vian2g02245 714 Pfam PA domain 320 405 IPR003137 -
Vian2g02245 714 FunFam Subtilisin-like protease SBT1.9 19 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02245 Vian-Chr2 42539380 42541686 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02245 10 713 Subtilisin-like Serine Gene Family AT1G04110 61.688 0.0 963
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02245 - - gmx:100790205 1260.36