Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02205 ATGGGGAGAGCTCCATGCTGCGAGAAAATGGGGTTGAAGAGAGGGCCATGGACTCATGAAGAAGATCAAATTCTCATCAATTACATCAACATTTATGGCCATTCTAATTGGCGTGCTCTGCCCAAACTAGCTGGTATATGGTCGGCTATAGCTGCGAGATTACCTGGTAGAACAGACAACGAGATAAAAAACGTGTGGCACACCCACTTGAAGAAGAGGTTGCCACAAAATTACCGACAAAGCCAAGAGCAACAACGAAGCAAAAAACAACCAAAGTTGGATGGGGACGCTTCCAAAATCAATTACCAAGGCGTCAAACTAGACCAACAACAAGACCCCGTGAATAACGTTCACGTTCATGCATCAACCAAAGAAGATAATAGCACAGAGGAAATGCCACTTTCTCCTCCCCAATGTTCTAGCGATATGTCTTCGCTCACCAATAGTGACAACAATAGCAGCATTAATAATAGTAATAATAATTGTGACATGTCCTCGCATGTTAATGATATTGACACACCGGAGAACAATCTTGCACTGGACGAGGATTTCTGGTCGGAAGTATTGTTATCTGACGATAGTTCCGGTGAGACAAGTGGATTTCCGAGCATTGATTATGGTCGATTTGAACCAATGTCTAGCGAAGAAGTAGGGGTGCTTATAGATGGTAGTTCGTCAAGTATGAGCGATGGCATGGACTTTTGGTGCAACGTTTACGCCAGAGCTGAGGAATTCAACCAGTTACTTGAATTATGA 756 0.4339 MGRAPCCEKMGLKRGPWTHEEDQILINYINIYGHSNWRALPKLAGIWSAIAARLPGRTDNEIKNVWHTHLKKRLPQNYRQSQEQQRSKKQPKLDGDASKINYQGVKLDQQQDPVNNVHVHASTKEDNSTEEMPLSPPQCSSDMSSLTNSDNNSSINNSNNNCDMSSHVNDIDTPENNLALDEDFWSEVLLSDDSSGETSGFPSIDYGRFEPMSSEEVGVLIDGSSSSMSDGMDFWCNVYARAEEFNQLLEL 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02205 251 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 74 IPR017930 -
Vian2g02205 251 Pfam Myb-like DNA-binding domain 14 70 IPR001005 -
Vian2g02205 251 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 46 - -
Vian2g02205 251 SMART sant 13 72 IPR001005 -
Vian2g02205 251 ProSiteProfiles Myb-like domain profile. 9 70 IPR001005 -
Vian2g02205 251 CDD SANT 16 70 IPR001005 -
Vian2g02205 251 MobiDBLite consensus disorder prediction 121 168 - -
Vian2g02205 251 MobiDBLite consensus disorder prediction 72 97 - -
Vian2g02205 251 SUPERFAMILY Homeodomain-like 8 74 IPR009057 -
Vian2g02205 251 Gene3D - 16 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02205 Vian-Chr2 42122480 42124336 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02205 1 251 MYB Transcription Factor Family AT2G31180 35.017 2.15e-42 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Vian2g02205 Myb_DNA-binding 9e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02205 K09422 - gmx:100775603 248.054