Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02200 ATGGCAAAGGAGCAAATTGAGGTGCTAAATGCGCTTGATGTTGCAAAAACGCAATGGTATCATTTCACAGCAATCGTCATCGCTGGAATGGGCTTTTTCACCGATGCATATGATCTATTCTGCATATCCCTTGTAACAAAGTTGCTTGGCCGCATATATTACCATGTCGACGGTGCACCAAAGCCCGGTACATTGCCTCCCAATGTTGCAGCTGCAGTAAATGGTGTGGCTTTCTGTGGAACACTTTCAGGTCAGCTTTTCTTTGGTTGGCTTGGTGATAAGATGGGAAGGAAAAGAGTCTATGGCATGACTCTGATGATGATGGTGATATGTTCCGTCGGTTCCGGCCTTTCATTCGGTCATAGTGCAAAATCTGTAATGGCAACTCTCTGTTTCTTCCGGTTCTGGCTTGGATTTGGCATTGGTGGAGACTATCCACTTTCTGCTACCATAATGTCTGAGTATTCTAACAAGAAGACTCGCGGGGCCTTCATTGCTGCAGTGTTTGCCATGCAGGGTTTTGGCATTTTGGCAGGTGGTATATTTGCAATTATAGTTTCAGCTGCATTCAATAGCAGGTATACTGCTCCAGCATATGAGGTTGATCCAGCCGGGTCAACAGTCGTACAAGCAGACTACATTTGGAGGATAATTGTGATGGTCGGAGCACTCCCAGCGGCATTGACTTACTACTGGCGGATGAAGATGCCGGAAACTGCCCGTTATACTGCTCTAGTAGCCAAGAACATGAAGCAGGCAGCAGCAGATATGTCTAAGGTTCTGCAGGTTGAGATTCAAGCTGAACCACAGAGTGAAGATCCGGCAAAGCCCAAGCCATATGGCTTGTTCTCAAAGGAGTTCCTCACTCGTCATGGACTGCATCTGCTTGGTACATCAAGCACTTGGTTCTTACTTGATATTGCATTTTACAGTCAAAATCTTTTCCAGAAGGACATCTTCAGTGCAATTGGTTGGATACCTCCAGCCAAAACCATGAATGCTATTGAGGAGGTTTACAAAATTGCAAGGGCTCAAACACTCATTGCTCTGTGCAGTACAGTTCCTGGCTACTGGTTCACGGTGGCTTTCATTGACAGGATAGGAAGATTTGCTATTCAATTGATGGGCTTCTTCTTCATGACTGTCTTCATGTTTGCTCTTGCCATCCCCTATGACCACTGGACTCATAAGGATAACCGGATAGGATTTGTGGTGATGTATTCATTGACCTTTTTCTTTGCAAACTTTGGGCCCAATGCTACCACGTTTGTGGTGCCAGCAGAGATTTTCCCTGCTAGATTCCGAAGTACTTGTCATGGAATTTCATCAGCATCTGGAAAGCTTGGGGCTATAGTTGGTTCCTTTGGATTCTTGTACTTGGCACAAAACAAGGACAAAAGCAAAGCTGATGCAGGGTACCCTGCAGGGATTGGTGTAAAGAATTCACTTATAGTCTTAGGTGTAGTTAACGTTCTTGGCTTCTTCTGCACTTTCTTGGTTCCTGAGGCAAAGGGAAGGTCGTTGGAGGAGATGTCTGGTGAGAATGAAGAGGATGTTGGGACCGGTGAAGAATCAGAACAATCACATTCTCACAACAACAACAAAACTGTTCCGTATGTTTAG 1623 0.4516 MAKEQIEVLNALDVAKTQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAPKPGTLPPNVAAAVNGVAFCGTLSGQLFFGWLGDKMGRKRVYGMTLMMMVICSVGSGLSFGHSAKSVMATLCFFRFWLGFGIGGDYPLSATIMSEYSNKKTRGAFIAAVFAMQGFGILAGGIFAIIVSAAFNSRYTAPAYEVDPAGSTVVQADYIWRIIVMVGALPAALTYYWRMKMPETARYTALVAKNMKQAAADMSKVLQVEIQAEPQSEDPAKPKPYGLFSKEFLTRHGLHLLGTSSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVAFIDRIGRFAIQLMGFFFMTVFMFALAIPYDHWTHKDNRIGFVVMYSLTFFFANFGPNATTFVVPAEIFPARFRSTCHGISSASGKLGAIVGSFGFLYLAQNKDKSKADAGYPAGIGVKNSLIVLGVVNVLGFFCTFLVPEAKGRSLEEMSGENEEDVGTGEESEQSHSHNNNKTVPYV 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02200 540 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 505 IPR020846 GO:0022857
Vian2g02200 540 MobiDBLite consensus disorder prediction 507 540 - -
Vian2g02200 540 Pfam Sugar (and other) transporter 25 512 IPR005828 GO:0016020|GO:0022857|GO:0055085
Vian2g02200 540 CDD MFS_PhT 25 504 - -
Vian2g02200 540 FunFam Inorganic phosphate transporter 1-6 20 527 - -
Vian2g02200 540 SUPERFAMILY MFS general substrate transporter 11 512 IPR036259 -
Vian2g02200 540 Gene3D MFS general substrate transporter like domains 20 529 IPR036259 -
Vian2g02200 540 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 21 503 - -
Vian2g02200 540 NCBIfam phosphate:H+ symporter 11 514 IPR004738 GO:0005315|GO:0006817|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02200 Vian-Chr2 42031067 42032689 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02200 1 518 Inorganic Solute Cotransporters AT3G54700 84.008 0.0 912
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02200 K08176 - gmx:100819445 1003.82