Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02190 ATGGGTAACAACTTGCACCAAGTACTCAGAAGCCTCTGTTTTAATACTCACTGGAACTACGCCATCTTTTGGAAGCTCAAACATCGTGCTCGAATGATCTTGACATGGGAGGACGCATACTATAACAATCCTGATGATTATGACTCTTCAGAAAATAAGCACTGCCAGAAGATCTTGGAACAGATTGGTTATGGGAAATTTTCGCACAACGCATTAGGGTTAGCAGTGGCTAAGATGTCATATCATGCATATTCATTAGGAGAAGGTATTGTTGGACAGGTTGCTGTAACAGGAAAGCATAGGTGGATCTGTGCAGATAATCAGGTTGCAGGTTCTGGCTTGTCTTTTGAGTTTGCTGATGGGTGGCAGTCTCAGTTTTCTGCTGGAATCAGGACTATTGCTGTTGTTGCTGTAGCCTCACTTGGTGTTGTTCAGCTTGGTTCTCTCAATAAAGTGATTGAAGATATGGGGTTTGTAGCTCATATCAGAAATCTCTTTCAAAATTTCTCAATGGCCCAATGTCCTAGTCAAATACAGGGTAGTTTGAAGAGTTCTTTATCTCAGTTGGATATATCGAAGGAAAATTTGTCTTCAGATGTTGTGCCGACTGGCTTTTACAATGCACAGAAATCTATGAAGAGTGAAACAGCAGATGTTTTAATGTCCCTTCAATGTTCTGGGAGGAACTATGCACTTCATTCTGCTTGTCAGAAAATGTCTGATAACGTGGCCAAGAAGAAGGGGCCTGAATTGTACAGTGATGAAAGTTCCATTTTGCTTCAGTCAATATCCAATATGATGAATGTGGAGCATCATGATTTTGAAGAGATGAAACCTCTTTATGGGAGGAAGTGTGAAGAAGGAAGTAGTGGTTGTAAAGATGTGAGGTTTGAATCAGAAAACAATGTTTCGTCATTTTTAAGTGACTTTATTACAGATAATGATTTAATATGTCCATCAGAAAAAGTCAGAGTTGATTCTGCATGTTTTCCCTCAGCTTTTCTTGATACAGTTGTTTGTGAAACTGATAAGTTGCATTGTGTGGATAATAACCAAAAAGGGGTGTTGAATTTCACCCAACCTTCAGATGCAAACTCCCAACATGTTGAAAAGTCAAAGTTTCGTACTGAGCCTTCTTACAATGATATGTCAAATGTGTTGAATTTCCCTGCTGGCTGTGAGCTACATGAAGCACTTGGACCATCTTTTCTGAAAGGGAGTAAAAATTTTGATTGGGCAGCGCAGTTTAATCAAGATATGAAAACTGTTGAAATGTCAGATGAGATTAGCACTAGCCAATTGACTTCTGAATCTCGTCCAGAGCATCTTTTGGAAGCACTGGTGGCCAACATTTGCCATAGTAATAATGATGTTAATAGTGAATTATCGTTTTGTACATCAATGCAATCTGCAATGGCCTCGGGAAAAAATCATGAAGCTTCTACTCACAATGTGTATGCTATTAATTCAGAAGGTTATTCAATAGATCAGTTCTCTCTTGTCAAAGAGGACAAACACCATTCCTTGAGTTCATCATCAGGGATATGTGGTGTGATGTCCTCCAAAGGTGTTTCATCTACATTCCCTAGTTCAAGTAGTGGACAACTTGAAAGGTCGTCTGAACCATCTAAGAACAGCAAAAAGAGGGCCAGGCCTGGGGAAAGTTGTAGGCCTCGGCCAAGGGACAGGCAATTAATCCAAGATCGTATTAAGGAGCTGAGAGAGTTGGTGCCAAATGGAGCAAAGTGCAGTATTGATTCCCTACTGGAGCGCGCCATAAAGCACATGCTCTTTCTCCAAAGCATAACTAAACATGCTGACAAGCTAACTGACTTTGGTGATACAAAGTCAAAGCTGCATCACATGGAAGCAGACATTCTTGGATCCTCTAGTTATGAGCAGGGCTCAAGCTGGGCAATGGAGGTAGGGGGTCATCTGAAAGTTCATTCAATATTAGTGGAGAATCTTAGCAAGAATGGACAGATGCTTGTTGAGATGCTCTGTGAGGAGTGCAGCCATTTTCTTGAAATAGCAGAAGCCATAAGAAGTTTGGGTCTTACCATTTTGAAAGGTGGAACTAAAGTTCATGGTGAAAAGATATGGATATGCTTTGTTGTCGAGGGTCAAAACAACAGAAATGTACACAGATTGGATATCTTGTGGCCGCTTGTTCAAATACTGCAATCGAAGAGCACGGTGTATTCACAATAA 2211 0.4052 MGNNLHQVLRSLCFNTHWNYAIFWKLKHRARMILTWEDAYYNNPDDYDSSENKHCQKILEQIGYGKFSHNALGLAVAKMSYHAYSLGEGIVGQVAVTGKHRWICADNQVAGSGLSFEFADGWQSQFSAGIRTIAVVAVASLGVVQLGSLNKVIEDMGFVAHIRNLFQNFSMAQCPSQIQGSLKSSLSQLDISKENLSSDVVPTGFYNAQKSMKSETADVLMSLQCSGRNYALHSACQKMSDNVAKKKGPELYSDESSILLQSISNMMNVEHHDFEEMKPLYGRKCEEGSSGCKDVRFESENNVSSFLSDFITDNDLICPSEKVRVDSACFPSAFLDTVVCETDKLHCVDNNQKGVLNFTQPSDANSQHVEKSKFRTEPSYNDMSNVLNFPAGCELHEALGPSFLKGSKNFDWAAQFNQDMKTVEMSDEISTSQLTSESRPEHLLEALVANICHSNNDVNSELSFCTSMQSAMASGKNHEASTHNVYAINSEGYSIDQFSLVKEDKHHSLSSSSGICGVMSSKGVSSTFPSSSSGQLERSSEPSKNSKKRARPGESCRPRPRDRQLIQDRIKELRELVPNGAKCSIDSLLERAIKHMLFLQSITKHADKLTDFGDTKSKLHHMEADILGSSSYEQGSSWAMEVGGHLKVHSILVENLSKNGQMLVEMLCEECSHFLEIAEAIRSLGLTILKGGTKVHGEKIWICFVVEGQNNRNVHRLDILWPLVQILQSKSTVYSQ 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02190 736 MobiDBLite consensus disorder prediction 526 540 - -
Vian2g02190 736 MobiDBLite consensus disorder prediction 541 565 - -
Vian2g02190 736 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 550 599 IPR011598 GO:0046983
Vian2g02190 736 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 733 IPR043561 GO:0003700|GO:0006355
Vian2g02190 736 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 166 IPR025610 -
Vian2g02190 736 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 563 604 IPR036638 GO:0046983
Vian2g02190 736 MobiDBLite consensus disorder prediction 526 565 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02190 Vian-Chr2 41859889 41865508 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02190 1 731 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 39.793 2.14e-151 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02190 - - ccaj:109796613 1245.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02190 2 41859889 41865508 Vian2g02190 2 41859889 41865508 ECH