Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02184 ATGGACTTAAACTACCCAGAAGATTTCTACTCCAACATCTCCACCCTAGAAACTTCTCACCATGATCTCCTCGGAACTGCCAGATCCTACGAGTGCATCTTTTGCAAGAGAGGCTTCACCACAGCACAAGCCTTAGGTGGACACATGAACATACACAGAAAACAAAGGGCCAACAACAACACCAAACCCACTGTCCCTCCTCCTTCAACTTCTAACAAAGTTGATGCAACCAACAACCATGCAGATCTCGTTCAAATTCCAACCCAATCCACTCCTTCTCATGCTAATCATCTTTCTTTTCCACCCACTTCACTCACTGTTACACCTTCCCATGCTCAGCTTTCGTCTGCAGAAAAAGACCAACTGGGACACGTCTTTCTGCAGGATTGGAGTACCACAAATTTGAGCTTCTACTCTAATCCATTGTGTCTTCATCAAATTAAGAATAAGTTTGAAGACACTGAAGAGAATGGCCTGGATTTGGAGCTCAGGTTGGGTCATCTTCCATAG 510 0.4451 MDLNYPEDFYSNISTLETSHHDLLGTARSYECIFCKRGFTTAQALGGHMNIHRKQRANNNTKPTVPPPSTSNKVDATNNHADLVQIPTQSTPSHANHLSFPPTSLTVTPSHAQLSSAEKDQLGHVFLQDWSTTNLSFYSNPLCLHQIKNKFEDTEENGLDLELRLGHLP 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02184 169 ProSitePatterns Zinc finger C2H2 type domain signature. 32 52 IPR013087 -
Vian2g02184 169 MobiDBLite consensus disorder prediction 54 76 - -
Vian2g02184 169 PANTHER OS07G0101800 PROTEIN 25 167 - -
Vian2g02184 169 ProSiteProfiles Zinc finger C2H2 type domain profile. 30 57 IPR013087 -
Vian2g02184 169 Pfam C2H2-type zinc finger 30 55 - -
Vian2g02184 169 Gene3D Classic Zinc Finger 6 85 - -
Vian2g02184 169 SUPERFAMILY beta-beta-alpha zinc fingers 28 56 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02184 Vian-Chr2 41781365 41781874 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02184 22 74 C2H2 Transcription Factor Family AT3G09290 49.153 6.90e-13 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02184 - - vun:114163022 195.667
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02184 2 41781365 41781874 Vian2g02184 2 41781365 41781874 ECH