Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02168 ATGGATGAGGAATTGGAAAGTTGTCCAATATGCGGCATTGATTTGGGTTGTGTTCCACTCGAGAAACTGAGGCCAGACCACAGTTTGCAAGATGTGAGGGCCAAAGTTTTCCCCTTGAAGGGAAGAAAGGTGAAGGCACCTGAAATTGTGACCTCAATACCATTACCAGCTAGGAGAAAGGAGAGATCTCTTTCGTCTTTGGTGGTGAACACTCCAAGGGTATCTACACAGGCAACAATGACAGGAAGAAGAACAAAACCTTCAAGAAAGGCTAGTGGTCTGCGGTCCACTAGTTTTTCCTTTGAAAAGCCCATTAAAAAAGAGGAAGATTTACTGGAAGATCATCTTGAGAGTTCAAGCTCACCTGAAAATTCAAATAAGTTTGCTCAGAATTCCGGACAGAGTATGTCCCCTTGTGAGGGTAGTCAATCTGCACCCAATAAAGGATCAGAGAATGGTGGCGAAGCATGGGATGCAAAATTGGATCTCTGGAAGCCTTTGAATTGTTTAGTAGAGGTGGCAAGTAGGAGTAAATCTTTCAAGTCTCATGTGCAAGGGTCTGATGCTAAATTAGAAATCACTCAAGTAAGTGAGAGTGACTCTCAGATGCACAAAACTAAAAATAAGGAAAATAAACGCAAGGCAAAAGTTGAGGATGAAAAGATTAGCCCTTATCCTGCCTCCTCAGATACAGCAAAACCCAATAAATTGCGCAGAATGCGCAAGAAGAAGGAGCCTGCTTCTGGAGAATCAAGCATATCACCCCAAGCTGTGCTTGATTCTGCCAGCAGTAATAGACTCTCTAGGACTGGTCCAATCTGGTTCTCCTTGGTAGCTTCAGAAAACCAGGGAGGAGATGCACCGTTGCCACAAATTCCTGCAAGTTATGTGAGAATCAAGGATGGTAGCGTACCAGTCTCATTCATCCAAAAATACCTAATGAAGAAACTGGACTTGACTAGTGAAACAGAGGTTGAGATTAAATGTATGGGACAATCAGTGCTACCTACATTGCGTCTATATAATTTGGTTGAGTTGTGGTTGGATACAGCATCGACCTCACAGAGAATTCCAGCAACTATCGGTTCCTCAGCAAAGGATTTTGTCATGGTATTGGCTTATGCTCGGAAGGTTCCACACCCATGA 1146 0.4337 MDEELESCPICGIDLGCVPLEKLRPDHSLQDVRAKVFPLKGRKVKAPEIVTSIPLPARRKERSLSSLVVNTPRVSTQATMTGRRTKPSRKASGLRSTSFSFEKPIKKEEDLLEDHLESSSSPENSNKFAQNSGQSMSPCEGSQSAPNKGSENGGEAWDAKLDLWKPLNCLVEVASRSKSFKSHVQGSDAKLEITQVSESDSQMHKTKNKENKRKAKVEDEKISPYPASSDTAKPNKLRRMRKKKEPASGESSISPQAVLDSASSNRLSRTGPIWFSLVASENQGGDAPLPQIPASYVRIKDGSVPVSFIQKYLMKKLDLTSETEVEIKCMGQSVLPTLRLYNLVELWLDTASTSQRIPATIGSSAKDFVMVLAYARKVPHP 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02168 381 MobiDBLite consensus disorder prediction 193 263 - -
Vian2g02168 381 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIP1 2 377 IPR044807 GO:0004842
Vian2g02168 381 MobiDBLite consensus disorder prediction 202 223 - -
Vian2g02168 381 MobiDBLite consensus disorder prediction 118 150 - -
Vian2g02168 381 MobiDBLite consensus disorder prediction 112 154 - -
Vian2g02168 381 MobiDBLite consensus disorder prediction 249 263 - -
Vian2g02168 381 MobiDBLite consensus disorder prediction 71 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02168 Vian-Chr2 41592729 41597987 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02168 2 300 C3H Transcription Factor Family AT2G30580 51.495 9.90e-84 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02168 K16277 - gmx:100793731 652.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02168 2 41592729 41597987 Vian2g02168 2 41592729 41597987 ECH