Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02167 ATGGCTCTTTCTGCCTCTCTGCTTCAACTTCAACCCTCTTCACAAAAGAAGAAAACTGCTGTTTCCAGAAGTTGGGTTCTGCTCGACCACCATGGCAAACCCACTGTGCTCGATGCAGACAAGCATGCCATCATGCGCCTCGTTAAAATTCACGCCAGGGATCTTCGGATTCTCGATCCTCTCTTATCCTATCCCTCCACCATTTTCGGAAGAGACAAAGTCATTGTTCTCAATCTAGAGCACATTAAAGCTATCATCACTGCAGATGAGGTGTTTCTGAGAGACCCAACGGATGATGACGTTGTGCCAATTGTTGAAGAGCTTCGACGACGGTTACCCAAAGTAAGTGCTTCTAGGGAAGGCCGAGGAGAAGAAGAGACCTGTGCTCAAGATGGTGAAGGAGGAGACGAAAATGAATTTCCATTTGAGATACGGGCTTTGGAAGTTTTATTTGAGGCAATTTGTAGTTTCCTTGACGCACGAACGAGAGAGTTAGAGACTGCTGCTTATCCAGCTTTGGACGAACTTACCTCTAAGATTAGCAGTCGTAATTTGGATAGAGTGAGAAAATTGAAATGTGCAATGACGAGGCTGACCAGTCGTGTTCAAAAGATTAGAGATGAACTAGAAAACCTACTTGATGATGACGACGACATGGCTGATCTTTACTTATCAAGAAAGTCGACGGTTTCATCATCTCCAACAAGTAGCTCTGATGCTCCCAAGTGGCTTTATGGTTCTCCAAATACAGGTTCAAGAATACACAAATCAAGCAGAGCAAGTGGAACAACAGTTCAAAGGGAGGATGATGTTGAGGAGCTTGAAATGTTACTTGAGGCCAATTTCATGCAAATTGACGGCACATTAAATAAATTGGCCACTTTGCGAGAATACATCGATGACACAGAAGATTACATCAACATACAGCTTGACAATCACCGAAACCAGCTGATTCAGCTGGAGCTCTTCATCAGTGCCGGCACTGTGTGTATGTCCTTATATTCATTGGTGGCTGCAATATTTGGTATGAACATTCCATACACATGGAAATCACCAGGCCACGAACATGTGTTTAAATGGGTGGTGATCTTTGCGGGAATGGTTTGTGCATCCTTGTTTTTATCCATAGTATCTTATGCCCGACGCAAAGGCCTTGTCGGGTCTTGA 1167 0.4404 MALSASLLQLQPSSQKKKTAVSRSWVLLDHHGKPTVLDADKHAIMRLVKIHARDLRILDPLLSYPSTIFGRDKVIVLNLEHIKAIITADEVFLRDPTDDDVVPIVEELRRRLPKVSASREGRGEEETCAQDGEGGDENEFPFEIRALEVLFEAICSFLDARTRELETAAYPALDELTSKISSRNLDRVRKLKCAMTRLTSRVQKIRDELENLLDDDDDMADLYLSRKSTVSSSPTSSSDAPKWLYGSPNTGSRIHKSSRASGTTVQREDDVEELEMLLEANFMQIDGTLNKLATLREYIDDTEDYINIQLDNHRNQLIQLELFISAGTVCMSLYSLVAAIFGMNIPYTWKSPGHEHVFKWVVIFAGMVCASLFLSIVSYARRKGLVGS 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02167 388 MobiDBLite consensus disorder prediction 227 266 - -
Vian2g02167 388 MobiDBLite consensus disorder prediction 227 261 - -
Vian2g02167 388 Gene3D - 6 96 - -
Vian2g02167 388 MobiDBLite consensus disorder prediction 116 137 - -
Vian2g02167 388 Gene3D Magnesium transport protein CorA, transmembrane region 104 317 - -
Vian2g02167 388 Coils Coil 188 215 - -
Vian2g02167 388 CDD Mrs2_Mfm1p-like 25 385 IPR039204 -
Vian2g02167 388 FunFam Magnesium transporter MRS2-1 13 96 - -
Vian2g02167 388 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 14 386 IPR039204 -
Vian2g02167 388 Pfam CorA-like Mg2+ transporter protein 277 374 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02167 Vian-Chr2 41585648 41589402 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02167 1 361 MRS2 Gene Family AT5G64560 69.648 9.86e-156 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02167 K16075 - gmx:100799368 659.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02167 2 41585648 41589402 Vian2g02167 2 41585648 41589402 ECH