Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02155 ATGGAGTCGCACGGCGGAGGCCCCCTTCGTTCCCGCAGTTCCCAGTCCCCTTCTCCTTCCCACTCCGCCTCAGCCTCCGCCACATCGTCAATCCACAAGCGCAAGCGTGCATCCGAAGACCACGCGCCTCCCTTCCCGCCCTCCTCCTTCTCCGCTGACACTCGCGACGGCGCCCTCACCTCCAATGACGACCTGGAGAGCATTTCCGCCCGTGGTGCCGACTCCGATTCAGACGACGACTCCGAGGACGCCGTCGTCGATGATGACGAAGAGGACTACGACAACGACTCCTCCATGCGCACCTTCACCGCCTCCAGACTCGGTAACCCTCCCTCTGCTCCCCGTAATACCAAGCTCAAGACTGATAACTCAGCTGTAAAAATTGAGAACTCCGACGGCGCAAAAGACGCCGCAAATGCCGGAGCTGGTGCCATGGAGATTGGACCTGTCCCTAGCATTGTGGTTAAGGAGGACCCGACTAAGATTTTTACAGATAATTTGCAAACGAGTGGGGCTTATACAGCTCGGGAAGAGAGTCTCAAGAAAGAGGAGGAAGCGGGAAGGCTTAAATTCGTATGCCATTCAAACGATGGTGTTGATGAGCATATGGTTTGGTTGATTGGATTGAAGAATATATTTGCTAGACAACTTCCCAATATGCCCAAGGAGTATATTGTTCGACTTGTCATGGACAGGAGCCACAAGTCTGTAATGGTCATAAGGCGTAATCACGTTGTTGGAGGCATTACATATCGCCCATATGCTAGCCAGAAGTTTGGTGAAATAGCCTTTTGTGCAATTACAGCTGATGAGCAAGTAAAGGGTTATGGTACCAGATTGATGAATCACTTAAAACAGTATGCACGTGATGTGGACGGGCTGACACATTTTCTCACATATGCTGACAACAATGCTGTTGGCTATTTTATCAAACAGGGATTTACAAAAGAGATTCACTTGGAGAAAGATCGATGGCAAGGTTATATAAAGGATTATGATGGAGGAATTCTGATGGAATGCAAGATAGATCCAAAGCTCCCTTACACTGATTTGTCAACTATGATCCGTCGTCAAAGGCAGGCTATTGATGAAAAAATCAGAGAGCTGTCAAACTGTCACATAGTCTATACTGGAATTGATTTTCAGAAGAAAGAAGCGGGCATTCCTAAAAAAATTATTGATGACATCCCCGGTTTGAGAGAGGCTGGATGGACTCCTGATCAGTGGGGTCATTCTCGATTCAGAAGTCTAAATGTCTCTACTGACAATACTACTAATCAAAAGCATTTGTCTGGTTTTATGCGATCACTTCTAAAGTCTATGCTTGAACACGCCGACGCATGGCCATTCAAGGAGCCTGTTGATGCACGGGATGTTCCTGATTATTATGACATCATCAAAGATCCAATGGATTTGAAGACAATGTCTAAAAGGGTGGAGTCAGAGCTATATTATGTAACATTTGAGATGTTTGTTGCCGATGTCAGAAGAATGTTTGCAAATGCGCGCACCTATAATTCTCCAGAAACCATTTATTACAAATGTGCTACAAGGTTAGAATCCCACTTTCAAAGCAAAGTACAAGCGGGTCTTCAGTCTGGCTAA 1605 0.466 MESHGGGPLRSRSSQSPSPSHSASASATSSIHKRKRASEDHAPPFPPSSFSADTRDGALTSNDDLESISARGADSDSDDDSEDAVVDDDEEDYDNDSSMRTFTASRLGNPPSAPRNTKLKTDNSAVKIENSDGAKDAANAGAGAMEIGPVPSIVVKEDPTKIFTDNLQTSGAYTAREESLKKEEEAGRLKFVCHSNDGVDEHMVWLIGLKNIFARQLPNMPKEYIVRLVMDRSHKSVMVIRRNHVVGGITYRPYASQKFGEIAFCAITADEQVKGYGTRLMNHLKQYARDVDGLTHFLTYADNNAVGYFIKQGFTKEIHLEKDRWQGYIKDYDGGILMECKIDPKLPYTDLSTMIRRQRQAIDEKIRELSNCHIVYTGIDFQKKEAGIPKKIIDDIPGLREAGWTPDQWGHSRFRSLNVSTDNTTNQKHLSGFMRSLLKSMLEHADAWPFKEPVDARDVPDYYDIIKDPMDLKTMSKRVESELYYVTFEMFVADVRRMFANARTYNSPETIYYKCATRLESHFQSKVQAGLQSG 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02155 534 MobiDBLite consensus disorder prediction 98 122 - -
Vian2g02155 534 FunFam Histone acetyltransferase KAT2A 186 350 - -
Vian2g02155 534 CDD Bromo_gcn5_like 433 529 - -
Vian2g02155 534 PANTHER GH11602P 27 533 IPR037800 GO:0004402
Vian2g02155 534 ProSiteProfiles Bromodomain profile. 442 513 IPR001487 GO:0005515
Vian2g02155 534 MobiDBLite consensus disorder prediction 8 31 - -
Vian2g02155 534 Gene3D - 411 532 IPR036427 GO:0005515
Vian2g02155 534 CDD NAT_SF 236 290 - -
Vian2g02155 534 ProSitePatterns Bromodomain signature. 447 505 IPR018359 -
Vian2g02155 534 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 196 343 IPR000182 GO:0016747
Vian2g02155 534 PRINTS Bromodomain signature 459 475 IPR001487 GO:0005515
Vian2g02155 534 PRINTS Bromodomain signature 445 458 IPR001487 GO:0005515
Vian2g02155 534 PRINTS Bromodomain signature 494 513 IPR001487 GO:0005515
Vian2g02155 534 MobiDBLite consensus disorder prediction 53 68 - -
Vian2g02155 534 MobiDBLite consensus disorder prediction 1 122 - -
Vian2g02155 534 Pfam Acetyltransferase (GNAT) family 236 314 IPR000182 GO:0016747
Vian2g02155 534 Gene3D - 185 349 - -
Vian2g02155 534 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 204 348 IPR016181 -
Vian2g02155 534 Pfam Bromodomain 435 517 IPR001487 GO:0005515
Vian2g02155 534 SUPERFAMILY Bromodomain 417 528 IPR036427 GO:0005515
Vian2g02155 534 SMART bromo_6 423 532 IPR001487 GO:0005515
Vian2g02155 534 MobiDBLite consensus disorder prediction 76 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02155 Vian-Chr2 41470067 41477994 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vian2g02155 Bromodomain 1.1e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02155 K06062 - gmx:100791610 929.858