Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02151 ATGATCAACATAGCCAAAGAGAGATGGCGTTTTGCTTATACAGCAATTTATTCTAGGCGAGTCATGCTTGCCTTGGCCAAAGAAGTCATGTCTAAGAGAAATACAAACACCCATCATTACTCTGAGCTCTTCCAAGCCCGATCTTCAAATTACAGCAGTACTCTAGAAATAATCGAGCCCATGATTCCGCAACATGGAACCAATCGTTATTCTTTGGTTCCTGATGTTGACAAGGTCCGGATTACCAGTATGGTCAAGGACAAAAACTTGTCAGCCTTTACAGAGTTTGGAGGAGTTGAAGGTGTTACAAACATTCTTGGAACCATTCCAGCAAAGGGAATCACTGGCAGCCATGATGATGTTGCCAAACGTATTCAAGTATTCGGTTCCAACACTTACCAGAGGCCCCCGCCTAAGTCTTTAATGAGTTTTGTGCTGGAAGCTTTCAATGACACTACTATCATTATCCTTCTTGTTTGCGCCGGTCTTTCCCTTGGTTTTGGCATAAAAGAACATGGCCCGGGGGAAGGCTGGTATGAAGGAGGGAGTATATTTGTAGCAGTGTTTCTGGTGGTGGTTGTTACCGCACTCAGCAACATCAGACAAGAGAGACAGTTTGACAAATTGTCAAAGATAAGCAACGACATCAAAGTAGAAGTAGTGAGAAATGGAAGGCGACAACAGATATCCATCTTTGATGTTGTAGTGGGAGATATTGCATTCCTTATGATTGGTGATCAGATTCCAGCTGATGGATTGTTCTTGAGTGGCCATTCTTTGCTAGTGGATGAATCCAGTATGACAGGTGAGAGCGATCATGTAGAAATTGAGTCTTCAAGAAGCCCTTTCTTGTTGTCTGGTGCAAAAGTGGTCGATGGATATGCTCAGATGCTAGTGACATCTGTGGGAACCAACACAGCATGGGGTGAAATGATGAGCTCGATATCGCGAGACACCAACGAAAGGACACCATTACAGGCTCGCCTTGACAAGTTAGCCTCTTCTGTTGGAAGGGTAGGCCTCAGAGTCGCTTTTCTTGTTTTCAGAGTCTTGTTATTTCGTTATTTCACTGGAAACACACAAGATAATGAAGGGAATACAGAGTTCCAGGGGAGTAAAACTGATATAAACGACATTTTCAATGCGGTTGTGAGGATTATCGCTGCTGCAGTGACAATTGTGGTGGTGGTAATCCCAGTGGGTCTGCCGTTGGTCGTCACTCTCACTCTTGCTTACTCCATGAAAAGAATGATGGCAAACCATGCAATGGTGAGGAAACTTTCTGCTTGCGAAACCATGGGATCGGCTACAGTTATTTGCACGGATAAAACTGGTACCTTAACCTTGAATCAAATGAGAGTCACCAAGTTTTGGCTTGGCCTGCAAAATGTCGAGGAAAAGTTTTCCAATGCAATGGCCCCTAAAGTTCTTGAATTATTCCAGCAAGGAGTTGGCCTCAACACAACTGGAAGTATCTATAAATCTTCATCAATATCTGAACCTGAAATTTCTGGTAGCCCAACAGAGAAAGCTATACTCTTGTGGGCCGTGTCAGATTTAGGCATGGACATGGATGAACTGAAGCGCACACACGAAGTTCTCCATGTTGAAACGTTTAACTCTGAAAAGAAACGAAGTGGCGTCGCAATAAGGAAGGAGACTAACAACACAGTTCACGTTCACTGGAAAGGTGCTGCAGAGATTATACTTGCAATGTGTTCAAACTATATTGACAATAACGGCATAGAGAAGTCCCTTGATGAAGAGCGGAGCAAACTTGAAAATATAATTGAAGGCATGGCTGCTAGCAGCCTTAGATGTATTGCTTTTGCTCACAAGCAGATTTCAGAAGATATTGATTATAATGATAAGGAGAAAGCACACCAAATCCTTAGAAAAGATGGCTTGACCTTGCTAGGTATTGTTGGCCTCAAGGATCCATGCCGACCCGACGCCAAGGAGGCTGTCGAAATGTGTAAACATGGAGGAGTTAGTGTGAAGATGATCACAGGTGATAACATATTCACAGCAAAAGCAATAGCAACAGAATGCGGAATATTAGACTTTGATGGCCATGTGAGTGCGGGAGAAGTGGTGGAGGGTGTGGAATTCAGGAATTATTCTGAAGAAGAGAGAATGGAGAGAGTAGAGAAGATCCGCGTGATGGCAAGATCATCCCCTTTGGACAAACATTTGATGGTGCAGTGCTTGAAAAAGAAAGGTCATGTTGTTGCAGTCACAGGAGATGGCACAAATGACGCACCTGCTTTGAAAGAAGCTGACATTGGACTTTCTATGGGGATCCAAGGAACTGAAGTTGCCAAGGAGAATTCTGACATTGTCATCTTAGATGACAACTTCAGTTCTGTTGCCACTGTTTTAAGGTGGGAAAGATGCGTTTACAACAACATCCAAAAGTTCATACAGTTTCAACTAACAGTAAATGTCACAGCTCTGGTGATAAATTTTTTTGCAGCCGTTACTTCGAGAGATGTTCCCCTGACAACAGGTCAACTTTTATGGGTAAATCTGATTTTGAGTACGCTAGGAGCGTTGGCACTGGCAACAGAAAGACCTACAAAGGAGTTAATGGAGAAAAAGCCAGTGGGTAGGACTGAGCCTCTTATTACTAATATTATGTGGAGAAACCTTTTAGCTCAAGCTTTATATCAGATTGTTGTCATCCTGGTTTTACAATTCAACGGAGAGTCAATCTTTAATGTTAGAGAGGAGGTAAAGGGTAGTCTAATTTTTAATAGTTTTGTTCTCTGCCAAGTATTCAACGAGTTCAACTCTAGAAATATGGAGAAACTAAATGTATTCCGAGGCCTTCACAGAAACCATTTGTTTCTTGGAATTGTGGGGATTACCCTTGTTCTTCAAGTTGTGATGGTGGAACTTTTAAGGAAGTTTGCTGATACAGAGAGATTAACATGGGAGCAATGGGGAATTTGTATTGGAATTGCAGCTGTGTCATGGCCAATTGCTTGGATTACAAAGCTCATACCAGTTTCAGATAAACCCTTCAACCACGTTAAGTGTGTAAAATTATTGGTCTCCTAG 3063 0.4244 MINIAKERWRFAYTAIYSRRVMLALAKEVMSKRNTNTHHYSELFQARSSNYSSTLEIIEPMIPQHGTNRYSLVPDVDKVRITSMVKDKNLSAFTEFGGVEGVTNILGTIPAKGITGSHDDVAKRIQVFGSNTYQRPPPKSLMSFVLEAFNDTTIIILLVCAGLSLGFGIKEHGPGEGWYEGGSIFVAVFLVVVVTALSNIRQERQFDKLSKISNDIKVEVVRNGRRQQISIFDVVVGDIAFLMIGDQIPADGLFLSGHSLLVDESSMTGESDHVEIESSRSPFLLSGAKVVDGYAQMLVTSVGTNTAWGEMMSSISRDTNERTPLQARLDKLASSVGRVGLRVAFLVFRVLLFRYFTGNTQDNEGNTEFQGSKTDINDIFNAVVRIIAAAVTIVVVVIPVGLPLVVTLTLAYSMKRMMANHAMVRKLSACETMGSATVICTDKTGTLTLNQMRVTKFWLGLQNVEEKFSNAMAPKVLELFQQGVGLNTTGSIYKSSSISEPEISGSPTEKAILLWAVSDLGMDMDELKRTHEVLHVETFNSEKKRSGVAIRKETNNTVHVHWKGAAEIILAMCSNYIDNNGIEKSLDEERSKLENIIEGMAASSLRCIAFAHKQISEDIDYNDKEKAHQILRKDGLTLLGIVGLKDPCRPDAKEAVEMCKHGGVSVKMITGDNIFTAKAIATECGILDFDGHVSAGEVVEGVEFRNYSEEERMERVEKIRVMARSSPLDKHLMVQCLKKKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKENSDIVILDDNFSSVATVLRWERCVYNNIQKFIQFQLTVNVTALVINFFAAVTSRDVPLTTGQLLWVNLILSTLGALALATERPTKELMEKKPVGRTEPLITNIMWRNLLAQALYQIVVILVLQFNGESIFNVREEVKGSLIFNSFVLCQVFNEFNSRNMEKLNVFRGLHRNHLFLGIVGITLVLQVVMVELLRKFADTERLTWEQWGICIGIAAVSWPIAWITKLIPVSDKPFNHVKCVKLLVS 1020
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02151 1020 SFLD C1.7: P-type atpase like 422 800 - -
Vian2g02151 1020 NCBIfam calcium-translocating P-type ATPase, PMCA-type 76 1004 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Vian2g02151 1020 PRINTS H+-transporting ATPase (proton pump) signature 747 763 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vian2g02151 1020 PRINTS H+-transporting ATPase (proton pump) signature 779 804 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vian2g02151 1020 PRINTS H+-transporting ATPase (proton pump) signature 593 611 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vian2g02151 1020 FunFam Calcium-transporting ATPase 764 1006 - -
Vian2g02151 1020 SUPERFAMILY HAD-like 438 851 IPR036412 -
Vian2g02151 1020 Gene3D - 450 647 IPR023299 GO:0000166
Vian2g02151 1020 Pfam Cation transporting ATPase, C-terminus 832 1002 IPR006068 -
Vian2g02151 1020 SUPERFAMILY Calcium ATPase, transduction domain A 216 314 IPR008250 -
Vian2g02151 1020 SUPERFAMILY Calcium ATPase, transmembrane domain M 96 1004 IPR023298 -
Vian2g02151 1020 PANTHER CATION TRANSPORTING ATPASE 64 1005 - -
Vian2g02151 1020 Pfam haloacid dehalogenase-like hydrolase 438 761 - -
Vian2g02151 1020 ProSitePatterns E1-E2 ATPases phosphorylation site. 442 448 IPR018303 -
Vian2g02151 1020 FunFam Calcium-transporting ATPase 194 316 - -
Vian2g02151 1020 Pfam E1-E2 ATPase 216 418 - -
Vian2g02151 1020 SMART Cation_ATPase_N_a_2 95 169 IPR004014 -
Vian2g02151 1020 Gene3D - 117 316 - -
Vian2g02151 1020 Gene3D - 437 792 IPR023214 -
Vian2g02151 1020 NCBIfam HAD-IC family P-type ATPase 717 827 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vian2g02151 1020 NCBIfam HAD-IC family P-type ATPase 381 475 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vian2g02151 1020 Gene3D - 147 1002 - -
Vian2g02151 1020 FunFam Calcium-transporting ATPase 450 647 - -
Vian2g02151 1020 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 447 644 IPR023299 GO:0000166
Vian2g02151 1020 SFLD p-type atpase 422 800 IPR044492 -
Vian2g02151 1020 PRINTS P-type cation-transporting ATPase superfamily signature 771 783 - -
Vian2g02151 1020 PRINTS P-type cation-transporting ATPase superfamily signature 440 454 - -
Vian2g02151 1020 PRINTS P-type cation-transporting ATPase superfamily signature 640 651 - -
Vian2g02151 1020 PRINTS P-type cation-transporting ATPase superfamily signature 662 672 - -
Vian2g02151 1020 PRINTS P-type cation-transporting ATPase superfamily signature 263 277 - -
Vian2g02151 1020 PRINTS P-type cation-transporting ATPase superfamily signature 747 766 - -
Vian2g02151 1020 Pfam Cation transporter/ATPase, N-terminus 97 164 IPR004014 -
Vian2g02151 1020 FunFam Calcium-transporting ATPase 642 792 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02151 Vian-Chr2 41421324 41424386 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02151 5 1009 Primary Pumps ATPases AT3G63380 66.700 0.0 1318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02151 K01537 - gmx:100790034 1682.92