Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02149 ATGGGTCTGGAAAAGAATATTTGTGTATTTCTTGATGTCTCAATTGATGCGGACCCCGTGGAAAGAATTGTTATTCAGCTTTTTGATAGTATTGTCCCAAAGACAGCCGAGAATTTTCGGGCGCTTTGTACAGGTGAGAAGGGCATTGGAGAATCAACTGGGAAACCTTTGCATTATAAGGGAACAAGCTTTCATCGTATAATTAGAGGTTTCATGGCTCAAGGTGGTGATTTTTCAAGGGGTAATGGCACTGGCGGGGAAAGTATATATGGTGGAAAATTTGCGGATGAAAATTTCAAACTAAGACATGATGGACCTGGCTTTCTTTCTATGGCTAATAGTGGCCCTAATACAAATGGATCTCAGTTTTTTATTACATTCAAGCGCCAACCACATCTTGATGGGAAACATGTTGTTTTTGGAAAAGTTGTCAATGGATTGGATGTTCTGAAGAAAATTGAGCTGGCAGGAACATCTGATGGGAAACCTACCCAGATAGTTAAAATTGTTGATTGCGGTGAAGTTTCTGAAACAAAAACTCAGCATACTGCTGAGAAGGAAAAAGGGAAAATGAGAAAAACAGGAAAACCCCTTCCTTCTGATGATAGTTCCGACTCTACTGACAAAAAGTCAAGGGGGAAAAGAAAAAAATCTTCCAAAGACACAAGGAAAAAGAGGAGAAGATACTCAACATCTGATAGTGATAGTTATTCCTCAGATTCTGAGTCAGATTCAGCTTCTGATTCTGAATCGGATTCATCTGATTCTGATTCTAGTTCCTCTAGTTATGGGAAACACCAGAAGAGGAGAAATAAGCGCAGGCATGGGAAGAAGAGGAAATTTGGACGAAAGCAGAGCAAGAAAAGCAGGCACAGTCGAAGCAGAAGATCAAAGCACAAGTCTAGGCGCTATGATGATTCAAGTGATAGCTCTAGTGGTAGCAGTAGTAGTTCTGGCGATGAGAAAACTGATCGTCGCACCTCAATTCGGCAAAGACATGTTGACAACAAAGCACAAAGAAATCTACACACAGAAAAACAACCTTCTAGTCTTCCTCGGCAAGATCAAATTATTCCGGAGCAAACAACGGATACTGAGGTTAGAAGAACTGTGGACAAGCAATCACATGAAGAAGGTGAATTGTCTCCAGAAAATGGGGCATTTGTGAATAACGGGCATGATACTAAAGCTGAATTTAGTGAACCTGCTAAGCAACATGCTAATTCAGATGATTCAAAGGAGAATAGAAGTGCAAGAACTGGGCGAAGTCCTACCAAGGATTCTGGTGAGCTAAACCAGGGACGTGCTTTGTTGCTGGCTAGTTCTGGTCAAAAAGCATCTGAACATGCAGCCCCTAAACATGGTCAAAGGTTTTCAAAAAGCCCTTCACCAAATGGCACACCTAAGCGTATTAAAAAAGGACGTGGGTTTACTGAGCGTTATGCCTTTGCCCGCAGATATCGTACTCCATCTCCTGAGCGGTCACCTCATGCATATAGGTATGGTGATAGAAATATAAGAAGGAACTTTGATAGAAACACAAGCTACAGAAGTTATTCTGAGCGCTCTCCACCACGACGTTATCGAAGCCCACCTGGTGGCAGAAATCGTCCAAGATACCAAAGCAGGAGAAGTCTCAGTAGGAGCATCTCTCGCAGTCCAGTGCGTGGGCGTTTTAGAGACCGTGACCGGAGTCGGAGCCCAAGACGTAGTGTTAGTCCTGAAGACAGGCGACCTCCAATAAGTGACAGATTAAAATCCCGACTTGGTCCAAGAAGCGATGAACGATTGGCAGACAGAAGGGGGAGGTCAAAGTCCAATTCTAGGAGCAGTGGCTCATCTCGGTCCAGATCCCCTGATGCTACACCACCAAAACGATATGATAAAAGGACTTCCCTATCTCGTAGCAGGTCTAAGTCCAGCTCTTCTTCCGGTCAGAAGGGTTTAGTTTCTTATGGAGATGCTAGTCCTGATTCTGGAGTAAGGTGA 1989 0.4339 MGLEKNICVFLDVSIDADPVERIVIQLFDSIVPKTAENFRALCTGEKGIGESTGKPLHYKGTSFHRIIRGFMAQGGDFSRGNGTGGESIYGGKFADENFKLRHDGPGFLSMANSGPNTNGSQFFITFKRQPHLDGKHVVFGKVVNGLDVLKKIELAGTSDGKPTQIVKIVDCGEVSETKTQHTAEKEKGKMRKTGKPLPSDDSSDSTDKKSRGKRKKSSKDTRKKRRRYSTSDSDSYSSDSESDSASDSESDSSDSDSSSSSYGKHQKRRNKRRHGKKRKFGRKQSKKSRHSRSRRSKHKSRRYDDSSDSSSGSSSSSGDEKTDRRTSIRQRHVDNKAQRNLHTEKQPSSLPRQDQIIPEQTTDTEVRRTVDKQSHEEGELSPENGAFVNNGHDTKAEFSEPAKQHANSDDSKENRSARTGRSPTKDSGELNQGRALLLASSGQKASEHAAPKHGQRFSKSPSPNGTPKRIKKGRGFTERYAFARRYRTPSPERSPHAYRYGDRNIRRNFDRNTSYRSYSERSPPRRYRSPPGGRNRPRYQSRRSLSRSISRSPVRGRFRDRDRSRSPRRSVSPEDRRPPISDRLKSRLGPRSDERLADRRGRSKSNSRSSGSSRSRSPDATPPKRYDKRTSLSRSRSKSSSSSGQKGLVSYGDASPDSGVR 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02149 662 MobiDBLite consensus disorder prediction 554 606 - -
Vian2g02149 662 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 174 IPR002130 GO:0000413|GO:0003755
Vian2g02149 662 MobiDBLite consensus disorder prediction 343 364 - -
Vian2g02149 662 MobiDBLite consensus disorder prediction 365 380 - -
Vian2g02149 662 MobiDBLite consensus disorder prediction 636 650 - -
Vian2g02149 662 MobiDBLite consensus disorder prediction 424 440 - -
Vian2g02149 662 FunFam Peptidyl-prolyl cis-trans isomerase CYP95 1 182 - -
Vian2g02149 662 SUPERFAMILY Cyclophilin-like 8 176 IPR029000 -
Vian2g02149 662 MobiDBLite consensus disorder prediction 319 342 - -
Vian2g02149 662 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 20 173 IPR002130 GO:0000413|GO:0003755
Vian2g02149 662 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 9 175 - -
Vian2g02149 662 MobiDBLite consensus disorder prediction 178 212 - -
Vian2g02149 662 MobiDBLite consensus disorder prediction 397 423 - -
Vian2g02149 662 MobiDBLite consensus disorder prediction 472 515 - -
Vian2g02149 662 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 134 IPR002130 GO:0000413|GO:0003755
Vian2g02149 662 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Vian2g02149 662 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 76 IPR002130 GO:0000413|GO:0003755
Vian2g02149 662 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 107 122 IPR002130 GO:0000413|GO:0003755
Vian2g02149 662 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 IPR002130 GO:0000413|GO:0003755
Vian2g02149 662 CDD cyclophilin_ABH_like 9 173 - -
Vian2g02149 662 MobiDBLite consensus disorder prediction 177 662 - -
Vian2g02149 662 Gene3D - 2 183 IPR029000 -
Vian2g02149 662 MobiDBLite consensus disorder prediction 265 300 - -
Vian2g02149 662 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 59 76 IPR020892 GO:0003755|GO:0006457
Vian2g02149 662 MobiDBLite consensus disorder prediction 621 635 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02149 Vian-Chr2 41401047 41408176 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02149 25 171 U-box Gene Family AT5G67530 48.322 1.07e-32 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02149 K09566 - gmx:100791082 769.615
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02149 2 41401047 41408176 Vian2g02149 2 41401047 41408176 ECH