Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02136 ATGGATTGGCATGTGACCAAGAATCGGAAGCAGAGAATCTGTCGTGAATGGTTTGTGAGGGAGAGGATGTGGCTTAGTGGTGCAGAGGCAGTGGGAACGAAGTCAGTAGCAGCTTTTTTTCCGACAGAAAGAAAAGAAGAAACGAAAGATGAACAAGAGTTGGCGGTGGTAGCAGAAGAGGAGCAGAAAAGATGTGCATTGTGTGAAGAGGCTTTTGAGGAGTTTTACAGTGATGAAATGGAGGAGTGGATGTATAGAGGAGCTGCGTACCTGTATCAACCCACAGAAAAATTAGCAACAAGCATGGAGAGGTCACAGTTAGGTCCCATAATTCATGCTAAATGCAGATCAGATCCTAAAATGCCTCTCTCCCGACATCTTCCAGAGTGTGCATATGAGTTGATATATCCCATTGGACAAGAAATTAGTGATATAAGTGGTCCGAACCAGTTACTGGATTAG 462 0.4416 MDWHVTKNRKQRICREWFVRERMWLSGAEAVGTKSVAAFFPTERKEETKDEQELAVVAEEEQKRCALCEEAFEEFYSDEMEEWMYRGAAYLYQPTEKLATSMERSQLGPIIHAKCRSDPKMPLSRHLPECAYELIYPIGQEISDISGPNQLLD 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02136 153 PANTHER PRE-MRNA CLEAVAGE COMPLEX II 1 119 IPR045154 GO:0000993|GO:0003729|GO:0006369|GO:0006378|GO:0006379
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02136 Vian-Chr2 41248095 41252972 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02136 1 118 C2H2 Transcription Factor Family AT4G04885 58.537 1.04e-44 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02136 K14400 - gmx:100794796 167.548