Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02135 ATGGGTAACGCAGACTATGCAAACCCAGTGGCTATTCCACCCCCTCAGTCATTCTTCAAGTCTCTCAAGTACTCCTTGAAAGAGACCTTTTTCCCAGATGACCCCTTTAGGAAGTTCAAGAACCAAACACCCTCTGTCAAGTTCGTCCTTGGACTTCAGTACTTCTTCCCCATCTTTGAATGGGCACCCAAATACACCCTCCAGTTCTTGAAATCAGACCTCATATCTGGCATCACCATTGCCAGTTTGGCCATTCCTCAAGGCATCAGCTACGCCAAGCTCGCCAACCTCCCTCCAATTCTTGGACTTTATTCGAGCTTCATACCCCCACTGATTTATGCTATGATGGGAAGCTCAAGGGATTTGGCAGTGGGAACTGTGGCGGTTGGATCACTTCTGATGGCTTCTATGTTGGGTCGAGTGGTGAACTACATCGAGAATCCAAACCTTTATCTCCATCTAGCTTTCACTGCTACATTCTTTGCTGGAATTTTGCAGGCATCACTGGGCCTCTTCAGGTTAGGGTTTATCGTGGATTTTCTGTCACATGCAACCATAGTAGGGTTCATGGGGGGAGCAGCCACAGTGGTTTGTCTGCAACAGCTAAAATCCATTCTTGGCCTTGAACATTTTACTCACGAGGCTGATATAGTGTCAGTGATGCGCTCTGTTTTCAGCCAAACTCACCAGTGGAGGTGGGAAAGCGCTGTGTTGGGTTGTTGCTTTATTTTCTTTCTCCTTGTCACAAGATACTTCAGCAAACGACAACCAAAGTTCTTCTGGGTGTCAGCAATGGCACCATTGGCATCGGTCATACTCGGAAGTCTGCTGGTTTATCTCACACACGCTGAGAAACATGGAGTTCAAGTGATAGGAAAATTGAAGAAGGGGCTGAATCCACCTTCCGTGACGAATTTGGTATTGGTGTCACCTTACATGGGAACTGCCATAAAAACTGGACTTGTCACCGGCATTATAGCACTTGCGGAAGGAATAGCAGTAGGCAGAAGCTTTGCAATGTTTAAAAATTATCATATTGATGGGAACAAAGAGATGATAGCTATTGGAACCATGAATATTTTTGGTTCGTTCACCTCTTGTTATCTCACCACAGGACCTTTTTCACGTTCGGCTGTGAACTATAATGCGGGGTGCAAAACTGCTGCATCAAACATTGTGATGGCAATAGCAGTGATGTTAACATTGTTATTCTTGACACCCTTGTTCCATTTCACTCCCCTGGTGGTGTTATCAGCCATAATTGTGTCAGCAATGCTCGGGCTCATTGATTATGAAGCAGCCATTCATTTGTGGAAAATCGACAAATTTGATTTCTTTGTGTGCTTCAGTGCTTACGTTGGTGTAGTCTTTGGCAGTGTTGAAATTGGCCTCGTCATAGCAGTTGCTGTATCTCTACTTCGAGTACTTCTCTTCATTGCAAGGCCAAGAACATTTCTCTTAGGCAACATTCCAAACTCTACAGTATACAGAAACGTGGAACAATATCCAAATGCAAATCATGTTCCTGGAATCCTAATTCTTGAAATTGATGCACCCATTTACTTTGCCAATGCAAGCTATTTAAGAGAAAGGATCACAAGGTGGATAGATGAAGAGGAGGATAGGATAAAAGCTTCAGACCAAACCAGTTTACAGTATGTTATAATTGATATGACTGCTGTTGGAAACATTGATACTAGCGGAATAAGCATGCTTGAAGAGTGCAAGAAAACTGTTGACAGAAGGGGGTTACAACTTGTTTTGGTAAATCCTGGAAGCGAGGTGATGAAGAAGCTGAACAAATCCAAGTTCCTTGATGAACTAGGGTATAAATGGGTGTATCTGACAGTTGAAGAGGCTGTTGGTGCATGCAATTTCATGCTCAACTCATACAAACCGAACCCCATGAAGGATGATTCAGAAGGTTGGAACAATGCCTGA 1941 0.4374 MGNADYANPVAIPPPQSFFKSLKYSLKETFFPDDPFRKFKNQTPSVKFVLGLQYFFPIFEWAPKYTLQFLKSDLISGITIASLAIPQGISYAKLANLPPILGLYSSFIPPLIYAMMGSSRDLAVGTVAVGSLLMASMLGRVVNYIENPNLYLHLAFTATFFAGILQASLGLFRLGFIVDFLSHATIVGFMGGAATVVCLQQLKSILGLEHFTHEADIVSVMRSVFSQTHQWRWESAVLGCCFIFFLLVTRYFSKRQPKFFWVSAMAPLASVILGSLLVYLTHAEKHGVQVIGKLKKGLNPPSVTNLVLVSPYMGTAIKTGLVTGIIALAEGIAVGRSFAMFKNYHIDGNKEMIAIGTMNIFGSFTSCYLTTGPFSRSAVNYNAGCKTAASNIVMAIAVMLTLLFLTPLFHFTPLVVLSAIIVSAMLGLIDYEAAIHLWKIDKFDFFVCFSAYVGVVFGSVEIGLVIAVAVSLLRVLLFIARPRTFLLGNIPNSTVYRNVEQYPNANHVPGILILEIDAPIYFANASYLRERITRWIDEEEDRIKASDQTSLQYVIIDMTAVGNIDTSGISMLEECKKTVDRRGLQLVLVNPGSEVMKKLNKSKFLDELGYKWVYLTVEEAVGACNFMLNSYKPNPMKDDSEGWNNA 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02135 646 ProSitePatterns SLC26A transporters signature. 99 120 IPR018045 GO:0008271|GO:0008272
Vian2g02135 646 PANTHER SULFATE TRANSPORTER 16 627 IPR001902 GO:0016020|GO:0055085
Vian2g02135 646 ProSiteProfiles STAS domain profile. 501 624 IPR002645 -
Vian2g02135 646 SUPERFAMILY SpoIIaa-like 503 624 IPR036513 -
Vian2g02135 646 FunFam Sulfate transporter 31 481 627 - -
Vian2g02135 646 Pfam STAS domain 502 620 IPR002645 -
Vian2g02135 646 Pfam Sulfate permease family 70 450 IPR011547 GO:0016020
Vian2g02135 646 CDD STAS_SulP_like_sulfate_transporter 502 617 - -
Vian2g02135 646 Gene3D STAS domain 481 626 IPR036513 -
Vian2g02135 646 NCBIfam sulfate permease 57 620 IPR001902 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02135 Vian-Chr2 41204904 41211675 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02135 3 634 Inorganic Solute Cotransporters AT4G02700 68.246 0.0 906
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02135 K17471 - gmx:100791091 1202.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02135 2 41204904 41211675 Vian2g02135 2 41204904 41211675 ECH