Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02122 ATGCCGCGAACTGGAGAAAGAAGAAGAAAAAGATACAACCTTAGCCGCTTGAACTTGAACCTATGTTTCTCAGTTCCCATGCAATCGTTCACACCACAATCTTCCCCTGCTGCCACCTCTTCAACCGTTCTTCAGAATCAAAACAAAAAACCTTTATCACAACCCGCCACGTCACCGTCCCCGATCAAGAACTTCAACTACGACCCTACTAACCCATTCCCGAATCTCGGACCCGAACCCGAACCTGCTGAGCTGGCCTCCGCTTTCGTCTCCCACCGCTTCTTCTTCACTTACCCCGGCCGCTCCAACTCCATCGTCGAATCCACCATCACCGACACCGATTGCGCTACCTCCTCGTCCTCGCTGGGAAATCCAGTCGCCACCGTCGACGAAAAGGCGAAAACGGCGCTCGAAGGCAGCGTTGCGGTAGAGATGTACTCGCTGGACCCCTACGCGGATTTCCGGCGCTCCATGGAGGAGATGGTGGCGGCGAGTCCCGAGTTGATCGACGTGGAGGCTAATTGGAAAGAGCTTCTTTTCTGCTACCTCGCGCTCAACCCGAGGAGCACGCACAAGTTCATCCTCTTCGCTTTTTCTGATCTTCTTCTAAGCCTCATGTCGCACTCTTCTCCTCCGCCGCAGGATGACGGTGCCGGCGATGTTGCCATCGGTGGCGATGGATGTTCGAATTAG 693 0.5469 MPRTGERRRKRYNLSRLNLNLCFSVPMQSFTPQSSPAATSSTVLQNQNKKPLSQPATSPSPIKNFNYDPTNPFPNLGPEPEPAELASAFVSHRFFFTYPGRSNSIVESTITDTDCATSSSSLGNPVATVDEKAKTALEGSVAVEMYSLDPYADFRRSMEEMVAASPELIDVEANWKELLFCYLALNPRSTHKFILFAFSDLLLSLMSHSSPPPQDDGAGDVAIGGDGCSN 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02122 230 MobiDBLite consensus disorder prediction 30 80 - -
Vian2g02122 230 NCBIfam uncharacterized plant-specific domain TIGR01568 141 206 IPR006458 -
Vian2g02122 230 ProSiteProfiles OVATE domain profile. 143 204 IPR006458 -
Vian2g02122 230 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 48 207 IPR038933 GO:0045892
Vian2g02122 230 MobiDBLite consensus disorder prediction 210 230 - -
Vian2g02122 230 Pfam Transcriptional repressor, ovate 147 205 IPR006458 -
Vian2g02122 230 MobiDBLite consensus disorder prediction 30 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02122 Vian-Chr2 41076546 41077238 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Vian2g02122 Ovate 7e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02122 - - pvu:PHAVU_001G153000g 354.369
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02122 2 41076546 41077238 Vian2g02122 2 41076546 41077238 ECH
Vian2g02122 2 41076546 41077238 Vian3g01876 3 21813821 21814444 PCT