Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02032 ATGGTTTCAGAGGAGGAGAGCAGCGGCCCCCCTGCAAGCCAATACACTGCACCACCTAGGGGTAGCACATACGGCGGAGGAGGAGGAAGTGGTAGAGGAGAGCCTAGGGGTGTTGCAAGGAGTGCCCCACAGAAAGTGTTGCCGATTGAGATACCCTCTATTCCATTGGAAGAGTTAAATAGGTTAACAGGAAACTTTGGTACAAAGGCTTTCATCGGCGAAGGTTCCTACGGACGGGTTTACTATGCAAAATTGAGTGATGGTACTGATGCTGCTATTAAGAAGCTGGATAATAGTTCTTCCCCAGAACCCGACTCCGATTTCGGCACTCAGTTATCGGTTGTCTCAAGACTGAAGCATGACAACTTTGTTGAGTTGATTGGATATTGTCTAGAGGCAGAAAACAGAATTTTGGTATACCAACATGCAAGCCTTGGTTCTTTGCATGACGTGTTACATGGAAGGAAGGGTGTACAAGGGGCTGAGCCTGGTCCACCGCTCGGCTACATTCAACAAGAGTCTTGGGAACATTTGGCTATCATGCTCCGGAGTATGTCCTCAATGAAACCTTCTGATACATTAGCCATAACGTATGCCATGACTGGGCAGATAACCCAGAAAAGTGATGTTTACAGTTTTGGTGTTGTGCTATTAGAACTCTTGACTGGAAGAAAACCAGTAGATCACACAATGCCGAAAGGACAACAAAGTCTTGTAACTTGGGCAACTCCAAGGCTGAGCGAGGACAAAGTGAAACAATGTGTTGATCCTAAGCTAAACAACGAGTATCCGCCAAAGGCTATTGCCAAGGTTTGCTCCTTTATGCTTCCACTATAG 837 0.4648 MVSEEESSGPPASQYTAPPRGSTYGGGGGSGRGEPRGVARSAPQKVLPIEIPSIPLEELNRLTGNFGTKAFIGEGSYGRVYYAKLSDGTDAAIKKLDNSSSPEPDSDFGTQLSVVSRLKHDNFVELIGYCLEAENRILVYQHASLGSLHDVLHGRKGVQGAEPGPPLGYIQQESWEHLAIMLRSMSSMKPSDTLAITYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVDPKLNNEYPPKAIAKVCSFMLPL 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02032 278 Pfam Protein tyrosine and serine/threonine kinase 70 155 IPR001245 GO:0004672|GO:0006468
Vian2g02032 278 Pfam Protein tyrosine and serine/threonine kinase 194 233 IPR001245 GO:0004672|GO:0006468
Vian2g02032 278 MobiDBLite consensus disorder prediction 1 20 - -
Vian2g02032 278 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 39 171 - -
Vian2g02032 278 ProSitePatterns Protein kinases ATP-binding region signature. 72 95 IPR017441 GO:0005524
Vian2g02032 278 FunFam probable protein kinase At2g41970 39 142 - -
Vian2g02032 278 SUPERFAMILY Protein kinase-like (PK-like) 43 276 IPR011009 -
Vian2g02032 278 ProSiteProfiles Protein kinase domain profile. 66 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian2g02032 278 MobiDBLite consensus disorder prediction 1 44 - -
Vian2g02032 278 Gene3D Phosphorylase Kinase; domain 1 39 142 - -
Vian2g02032 278 Gene3D Transferase(Phosphotransferase) domain 1 166 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02032 Vian-Chr2 39977768 39979373 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02032 57 274 Receptor kinase-like Gene Family AT4G02010 35.606 7.52e-42 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Vian2g02032 PK_Tyr_Ser-Thr 4.1e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02032 - - gmx:100812507 401.749