Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02023 ATGTCTTCTTTAACTCATTCCCTTCTCACCACAACCATTTTCTCTGTGCTCACAATCTTTCTTCATCCATCAAATGCTCAACTGAGTTCAACCTTCTACTCCACCACATGCCCTAACGTGTCTTCCATTGTTCGCAGTGTTATTCAGCAGGCTCTGCAATCTGATACTCGTATTGCTGCCAGCCTAACTCGTCTTCATTTTCATGATTGCTTTGTTAATGTACACATTTCAAGAAGCATAATTCTCGTTTTGATTTTGGTATCGTCATGCACTGTCAGATATCAGATAAGTATTACTTTTGAGTTTCAGGGATGTGATGGGTCTCTTTTGTTAGACCAAGGTGGGAACATAACGCTGAGCGAGAAAAATGCAGCGCCTAACAATAATTCCGCTCGTGGCTTCAACGTAGTCGACAACATAAAGACATCTCTTGAAAATTCATGCCCTGGTGTTGTATCTTGTGCTGATATTCTTGCCCTTGCTGCTGAAGCTTCTGGAGGAGGACCTTCATGGACCGTACTACTAGGCAGAAGGGACGGTTTGATTGCAAACCAATCTGGTGCTAACACTTCCATTCCTGCTCCAACTGAAAGCTTGGCCAATGTCACAGCAAAATTTTCTGCCGTTGGTTTAAACATAACTGATCTCGTTGCATTATCTGGTGCACACACTTTTGGTCGTGCACAGTGCAGGTTTTTCAACCAGAGGCTGTTCAACTTCAGTGGCACGGGTAGCCCTGATCCCACGCTGAACTCGAGCTATTTAGCAACCCTGCAGCAAAACTGTCCACAAAATGGAAACGGGAACACTCTGAACAACCTTGACCCTTCTTCCCCAGACACCTTCGACAACAACTACTTCCAAAATCTTCTCAACAATCAGGGTCTTCTTCAAACAGACCAAGAACTTTTTTCCACTAGTGGCTCCGCCACAATATCCATCGTCAACAACTTCGCCAACAACCAAACCGCCTTCTTCCAAGCCTTTGCTCAGTCCATGATTAACATGGGTAATATTAGCCCCTTAACAGGAAGCCAGGGAGAAATCAGATTAGATTGTAAGAAAGTCAATGGAAGCTAA 1080 0.4407 MSSLTHSLLTTTIFSVLTIFLHPSNAQLSSTFYSTTCPNVSSIVRSVIQQALQSDTRIAASLTRLHFHDCFVNVHISRSIILVLILVSSCTVRYQISITFEFQGCDGSLLLDQGGNITLSEKNAAPNNNSARGFNVVDNIKTSLENSCPGVVSCADILALAAEASGGGPSWTVLLGRRDGLIANQSGANTSIPAPTESLANVTAKFSAVGLNITDLVALSGAHTFGRAQCRFFNQRLFNFSGTGSPDPTLNSSYLATLQQNCPQNGNGNTLNNLDPSSPDTFDNNYFQNLLNNQGLLQTDQELFSTSGSATISIVNNFANNQTAFFQAFAQSMINMGNISPLTGSQGEIRLDCKKVNGS 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02023 359 ProSiteProfiles Plant heme peroxidase family profile. 27 357 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian2g02023 359 Gene3D - 32 357 - -
Vian2g02023 359 PRINTS Haem peroxidase superfamily signature 215 230 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian2g02023 359 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian2g02023 359 PRINTS Haem peroxidase superfamily signature 275 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian2g02023 359 FunFam Peroxidase 193 336 - -
Vian2g02023 359 Pfam Peroxidase 44 321 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian2g02023 359 PANTHER PEROXIDASE 72-RELATED 22 356 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian2g02023 359 ProSitePatterns Peroxidases proximal heme-ligand signature. 215 225 IPR019793 -
Vian2g02023 359 Gene3D Peroxidase, domain 2 193 336 - -
Vian2g02023 359 SUPERFAMILY Heme-dependent peroxidases 27 357 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vian2g02023 359 CDD secretory_peroxidase 27 356 IPR033905 GO:0004601|GO:0042744
Vian2g02023 359 PRINTS Plant peroxidase signature 331 344 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian2g02023 359 PRINTS Plant peroxidase signature 167 182 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian2g02023 359 PRINTS Plant peroxidase signature 214 226 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian2g02023 359 PRINTS Plant peroxidase signature 273 288 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian2g02023 359 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian2g02023 359 PRINTS Plant peroxidase signature 289 306 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian2g02023 359 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02023 Vian-Chr2 39887837 39889246 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02023 8 359 Peroxidase AT5G06720 67.887 6.10e-168 470
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02023 K00430 - gmx:100810355 548.895