Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02013 ATGCCGGTGCCTCCGTGGCTTTCATGTATGGTTACTTCTTGCATAAAGCCTTTTAGGCCTCATGCCATCGTGAGCAGTGATGATGATGATGATGAGCTTCTATGGTGTAAAGATATTCGGAGACATTCTCGTGGTGAATTTTCCTTTGCTGCATGTCAGGCCAATCAGGAAATTGAAGATCATAGCCAAGTTGAGATTGGCTCTAATGAGTTATTTGTTGGGGTTTATGATGGTCACGGTGGTGATGATTGTTCTCGTTTTATTAAAGCTCGTCTCTTCAACAATTTAATAAACGTTGCTAGGAATCAGGGAACTATAGACGAAGAAACTTTGAGGGAAGCTTTTGCTATGACAGAGGATGGTTTTATGTTACTTGTTCAGAGGGGTTATGAGTTACAGAACAATTTGGCAACTGTAGGTTCCTGTTGTCTGGTTGGTGTTATCTGGGAAGGAGTCCTATATATCTCCAATCTTGGAGACTCTCGTGCCATTGTTGGAACTTTAAGTACATGTAGAAGCATCACTACTCAACAGTTGACAACAGAACATAATTGCATCAGGGAGGAAATTAGACAAGAACTTAGGGCTAAGCATCCTAATGATCCAGATATTGTAGTCTTAGAACGTGGAGCATGGCGTGTTAAAGGCATCATCCAGGTGTCCAGAACCATAGGAGATGCGTATCTGAAGAGTCCAACTTATATGAAGCCACCTCTCACTGTACCTGTGCTGTCTGCAGAACCAACTCTAAATACACGAGTTTTGACATCCGATGACAAATTTCTTATATTTGCATCGGATGGACTTTGGGAACACTTGACAAATCAGCAAGCAGCTGAGATTGTTCACTTGAATCCTCGAAGAGGGATTGCAAGAAGACTTATTAAGGCTGCTGTACAGTCGGCAGCTAAAAGAGCGAATATGGAATATAGAGCGCTTCGGGACTTGCAGGGAGGGAGCAGACGGGTTTATCATGATGACATTACTGTGGTTGTTGTCTTCCTCGACGGTCCCTCACGTTTCAATGTGCAACAGTTGTCCCTAAAAGCGTTCGAAGACGAAGCTGGAGTATCAGAATTTCAAAGTCTACACGATTTGATGTGA 1104 0.4284 MPVPPWLSCMVTSCIKPFRPHAIVSSDDDDDELLWCKDIRRHSRGEFSFAACQANQEIEDHSQVEIGSNELFVGVYDGHGGDDCSRFIKARLFNNLINVARNQGTIDEETLREAFAMTEDGFMLLVQRGYELQNNLATVGSCCLVGVIWEGVLYISNLGDSRAIVGTLSTCRSITTQQLTTEHNCIREEIRQELRAKHPNDPDIVVLERGAWRVKGIIQVSRTIGDAYLKSPTYMKPPLTVPVLSAEPTLNTRVLTSDDKFLIFASDGLWEHLTNQQAAEIVHLNPRRGIARRLIKAAVQSAAKRANMEYRALRDLQGGSRRVYHDDITVVVVFLDGPSRFNVQQLSLKAFEDEAGVSEFQSLHDLM 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02013 367 SUPERFAMILY PP2C-like 55 338 IPR036457 -
Vian2g02013 367 SMART PP2C_4 40 333 IPR001932 -
Vian2g02013 367 PANTHER PROTEIN PHOSPHATASE 44 333 IPR015655 GO:0004722|GO:0006470
Vian2g02013 367 ProSiteProfiles PPM-type phosphatase domain profile. 46 335 IPR001932 -
Vian2g02013 367 Gene3D - 29 340 IPR036457 -
Vian2g02013 367 ProSitePatterns PPM-type phosphatase domain signature. 72 80 IPR000222 GO:0043169
Vian2g02013 367 Pfam Protein phosphatase 2C 68 303 IPR001932 -
Vian2g02013 367 CDD PP2Cc 53 335 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02013 Vian-Chr2 39792666 39794442 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02013 6 360 PP2C-type Phosphatase Gene Family AT5G06750 50.130 1.85e-129 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02013 K01102 - gmx:100806476 425.246